RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LRRC46Q96FV0 321 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 WDYHV1Q96HA8 205 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 HBEGFQ99075 208 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 MRPL46Q9H2W6 279 aaKnown RBP15.39■□□□□ 0.05
SMN2-216ENST00000638794 BRF2Q9HAW0 419 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 GALNT9Q9HCQ5 603 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 CCM2LQ9NUG4 571 aaPredicted RBP15.39■□□□□ 0.05
SMN2-216ENST00000638794 DMGDHQ9UI17 866 aaKnown RBP15.39■□□□□ 0.05
SMN2-216ENST00000638794 ZNF639Q9UID6 485 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 ST6GALNAC2Q9UJ37 374 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 ZNF225Q9UK10 706 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 CFL2Q9Y281 166 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 PLLPQ9Y342 182 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 A6NNC1 897 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 A8MT66 165 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 TRIM49D1C9J1S8 452 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 POC1B-GALNT4F8VUJ3 575 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 CDH16O75309 829 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 KRT38O76015 456 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 CBX7O95931 251 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 NAGAP17050 411 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 PTGDSP41222 190 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 NAGLUP54802 743 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 PLCXD2Q0VAA5 305 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 SF3B4Q15427 424 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMN2-216ENST00000638794 TMEM81Q6P7N7 255 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 NUP54Q7Z3B4 507 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 YRDCQ86U90 279 aaKnown RBP15.38■□□□□ 0.05
SMN2-216ENST00000638794 TMEM151AQ8N4L1 468 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 C1orf52Q8N6N3 182 aaKnown RBP15.38■□□□□ 0.05
SMN2-216ENST00000638794 FAM83FQ8NEG4 500 aaPredicted RBP15.38■□□□□ 0.05
SMN2-216ENST00000638794 FAM222BQ8WU58 562 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 DCAKDQ8WVC6 231 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 ABTB1Q969K4 478 aaPredicted RBP15.38■□□□□ 0.05
SMN2-216ENST00000638794 CTHRC1Q96CG8 243 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 CNRIP1Q96F85 164 aaPredicted RBP15.38■□□□□ 0.05
SMN2-216ENST00000638794 LCORQ96JN0 433 aaPredicted RBP15.38■□□□□ 0.05
SMN2-216ENST00000638794 TRIB1Q96RU8 372 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 NODALQ96S42 347 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 FOXC2Q99958 501 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 OSBPL11Q9BXB4 747 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 C1QTNF3Q9BXJ4 246 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 CXXC4Q9H2H0 198 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 EHD3Q9NZN3 535 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 CBLCQ9ULV8 474 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 SNX6Q9UNH7 406 aa15.38■□□□□ 0.05
SMN2-216ENST00000638794 ACANP16112 2415 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 C2orf72A6NCS6 295 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 MBD3L4A6NDZ8 208 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 MBD3L3A6NE82 208 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 MBD3L5A6NJ08 208 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 CD8B2A6NJW9 211 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 SNPHO15079 494 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 ACOX3O15254 700 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 ICOSLGO75144 302 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 UGT2B11O75310 529 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 TACR1P25103 407 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 CNTFP26441 200 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 ECHS1P30084 290 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 ALDH9A1P49189 494 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 AGFG1P52594 562 aaKnown RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 MRPS35P82673 323 aaKnown RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 LTB4RQ15722 352 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 TRMT12Q53H54 448 aaKnown RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 TCHHL1Q5QJ38 904 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 SLC30A6Q6NXT4 461 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 OR52R1Q8NGF1 315 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 MBD3L2Q8NHZ7 208 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 UHMK1Q8TAS1 419 aaKnown RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 IFT81Q8WYA0 676 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 RMND5BQ96G75 393 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 ZNF681Q96N22 645 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 FMO2Q99518 471 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 TMUB1Q9BVT8 246 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 EPB41L4BQ9H329 900 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 KLRF1Q9NZS2 232 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 TRPS1Q9UHF7 1281 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 FOXD3Q9UJU5 478 aaPredicted RBP15.37■□□□□ 0.05
SMN2-216ENST00000638794 ZNF180Q9UJW8 692 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 MAPRE3Q9UPY8 281 aa15.37■□□□□ 0.05
SMN2-216ENST00000638794 DIAPH2O60879 1101 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 URI1O94763 535 aaPredicted RBP15.36■□□□□ 0.05
SMN2-216ENST00000638794 OR4F21O95013 312 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 RHOXF2BP0C7M4 288 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 PCSK2P16519 638 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 EMDP50402 254 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 SNTA1Q13424 505 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 CEBPEQ15744 281 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 CDC20BQ86Y33 519 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 C9orf106Q8NAJ2 232 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 NOA1Q8NC60 698 aaKnown RBP15.36■□□□□ 0.05
SMN2-216ENST00000638794 FAIM2Q9BWQ8 316 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 TSPYL1Q9H0U9 437 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 CALHM2Q9HA72 323 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 SERHLQ9NQF3 203 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 NMRK1Q9NWW6 199 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 HEY2Q9UBP5 337 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 VPS29Q9UBQ0 182 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 PRODH2Q9UF12 536 aa15.36■□□□□ 0.05
SMN2-216ENST00000638794 FETUBQ9UGM5 382 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms