RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 THOC1Q96FV9 657 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 EPSTI1Q96J88 318 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM71F1Q96KD3 344 aaPredicted RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 C17orf77Q96MU5 243 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CYP2S1Q96SQ9 504 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SYT15Q9BQS2 421 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 FAM213AQ9BRX8 229 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 ATG101Q9BSB4 218 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 TCHPQ9BT92 498 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 PRRG4Q9BZD6 226 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 MIS12Q9H081 205 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SDCBP2Q9H190 292 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 LINC00597Q9H2U6 94 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 SNX25Q9H3E2 840 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 DPEP3Q9H4B8 488 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 THAP9Q9H5L6 903 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 APOBEC3GQ9HC16 384 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 TCF7L2Q9NQB0 619 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 DMAC2Q9NW81 257 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 COMMD8Q9NX08 183 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 RBAKQ9NYW8 714 aaPredicted RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 HMGXB4Q9UGU5 601 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 APPL1Q9UKG1 709 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 POU2F3Q9UKI9 436 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CDH9Q9ULB4 789 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 GPR132Q9UNW8 380 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 JRKLQ9Y4A0 524 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 CPQQ9Y646 472 aa2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 URB1O60287 2271 aaKnown RBP2.25□□□□□ -2.05
SMARCB1-208ENST00000634926 GOLGA4Q13439 2230 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ILVBLA1L0T0 632 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SMIM30A4D0T7 59 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 CLDN5O00501 218 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ARPC2O15144 300 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 CTDSPLO15194 276 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TTI1O43156 1089 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SNX3O60493 162 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 HUS1O60921 280 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 NME6O75414 186 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 RAD51DO75771 328 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 P4HA1P13674 534 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 GAP43P17677 238 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 AZU1P20160 251 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 JAK1P23458 1154 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 GJB2P29033 226 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 MNDAP41218 407 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 GLIPR1P48060 266 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 NPBWR1P48145 328 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 IFNAR2P48551 515 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 VAMP7P51809 220 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF132P52740 706 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ART1P52961 327 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 NME5P56597 212 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 YBEYP58557 167 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TFAMQ00059 246 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 MYL7Q01449 175 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 FOLH1Q04609 750 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 KDSRQ06136 332 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 CACNG1Q06432 222 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SULT2A1Q06520 285 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF33AQ06730 810 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 KLC1Q07866 573 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 KIF5AQ12840 1032 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TAF10Q12962 218 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SNTA1Q13424 505 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 HNRNPDQ14103 355 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ODF4Q2M2E3 257 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 HFEQ30201 348 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZCWPW2Q504Y3 356 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 EOGTQ5NDL2 527 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 IRAK1BP1Q5VVH5 260 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM215Q68D42 235 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 RAB12Q6IQ22 244 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PODNL1Q6PEZ8 512 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 CLEC20AQ6ZU45 233 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 IL17RELQ6ZVW7 336 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 CREB3L2Q70SY1 520 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 LPCAT2Q7L5N7 544 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PIGWQ7Z7B1 504 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZNF554Q86TJ5 538 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 EXOC3L1Q86VI1 746 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 MEX3DQ86XN8 651 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM25Q86YD3 366 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 TMEM139Q8IV31 216 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 ZC3H3Q8IXZ2 948 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PEX5LQ8IYB4 626 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 APCDD1Q8J025 514 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 THEM5Q8N1Q8 247 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 GPD1LQ8N335 351 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 RTL3Q8N8U3 475 aaKnown RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 LPCAT1Q8NF37 534 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 LILRB1Q8NHL6 650 aaPredicted RBP2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SLC26A7Q8TE54 656 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 SCFD1Q8WVM8 642 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 CKAP2Q8WWK9 683 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 RLN3Q8WXF3 142 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 HSD17B8Q92506 261 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 PGM2Q96G03 612 aa2.24□□□□□ -2.05
SMARCB1-208ENST00000634926 C5orf30Q96GV9 206 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms