RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 FAAHO00519 579 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PGRMC2O15173 223 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PI15O43692 258 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SLITRK5O94991 958 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SNX4O95219 450 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TIMP1P01033 207 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PRNPP04156 253 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 THY1P04216 161 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PCCBP05166 539 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 EPHX1P07099 455 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 FHP07954 510 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TCEA1P23193 301 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 DDX6P26196 483 aaKnown RBP eCLIP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PEBP1P30086 187 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CSTF2P33240 577 aaKnown RBP eCLIP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 RPL3P39023 403 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 NNMTP40261 264 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 BCL6P41182 706 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 IL12RB1P42701 662 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CCT3P49368 545 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CAV3P56539 151 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 RPS25P62851 125 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PSPHP78330 225 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 OLR1P78380 273 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 HOXC5Q00444 222 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CDK3Q00526 305 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CDK5Q00535 292 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 MXD1Q05195 221 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 MAP4K2Q12851 820 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TARDBPQ13148 414 aaKnown RBP eCLIP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SLAMF1Q13291 335 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 FGL2Q14314 439 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 INSL4Q14641 139 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 LARS2Q15031 903 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 GLYR1Q49A26 553 aaPredicted RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TMEM52BQ4KMG9 183 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 FNDC3BQ53EP0 1204 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 DCST1Q5T197 706 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 METRNLQ641Q3 311 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TMC5Q6UXY8 1006 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 IQCHQ86VS3 1027 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C17orf64Q86WR6 236 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 MMAAQ8IVH4 418 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SLC34A3Q8N130 599 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 FBXL6Q8N531 539 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C12orf76Q8N812 135 aaPredicted RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 FAM181AQ8N9Y4 354 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SIMC1Q8NDZ2 872 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TMIEQ8NEW7 156 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 OR4K5Q8NGD3 323 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 OR2A1Q8NGT9 310 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 OR6F1Q8NGZ6 308 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SPPL3Q8TCT6 385 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SETD7Q8WTS6 366 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 POF1BQ8WVV4 589 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TMEM203Q969S6 136 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 RAD51AP1Q96B01 352 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CNRIP1Q96F85 164 aaPredicted RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C16orf58Q96GQ5 468 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TMEM80Q96HE8 168 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 ZNF582Q96NG8 517 aaPredicted RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 NELL2Q99435 816 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SLX1AQ9BQ83 275 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C17orf62Q9BQA9 187 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SLC30A2Q9BRI3 323 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 ZNF649Q9BS31 505 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 DPH7Q9BTV6 452 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SRRQ9GZT4 340 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 MCOLN1Q9GZU1 580 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 POLR2J3Q9H1A7 115 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C6orf106Q9H6K1 298 aaPredicted RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 DDX31Q9H8H2 851 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PELI2Q9HAT8 420 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SLC6A20Q9NP91 592 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 EXOSC4Q9NPD3 245 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 SNTG1Q9NSN8 517 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TXNL4BQ9NX01 149 aaKnown RBP4.06□□□□□ -1.76
SEC22B-202ENST00000618538 ZSCAN32Q9NX65 697 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TVP23BQ9NYZ1 205 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 KLHL3Q9UH77 587 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 MKLN1Q9UL63 735 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 GPR34Q9UPC5 381 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 MGAT4BQ9UQ53 548 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CFL2Q9Y281 166 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TRAPPC4Q9Y296 219 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 KLHL20Q9Y2M5 609 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 GPR52Q9Y2T5 361 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 OR1A2Q9Y585 309 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PEX16Q9Y5Y5 336 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C2orf16Q68DN1 1984 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 TRPM6Q9BX84 2022 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 A0A087WUU8 490 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 CENPVL1A0A0U1RR11 272 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 A0A1W2PQ09 198 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 A0A1W2PR48 441 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 A0A1W2PRQ8 180 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 LRIT2A6NDA9 550 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 IGLON5A6NGN9 336 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 PRR19A6NJB7 356 aa4.06□□□□□ -1.76
SEC22B-202ENST00000618538 C5orf58C9J3I9 102 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms