RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 HSPB3Q12988 150 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MICAQ29983 383 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 LRRC37A5PQ49AS3 106 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 ZNF678Q5SXM1 525 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SLC6A19Q695T7 634 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 NANPQ8TBE9 248 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 MOCOSQ96EN8 888 aa8.39□□□□□ -1.07
TTC28-208ENST00000612946 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
TTC28-208ENST00000612946 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 RAB3DO95716 219 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 FUCA1P04066 466 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SNRNP70P08621 437 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 EFNA1P20827 205 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 AVPR1BP47901 424 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 EIF2B1Q14232 305 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 ABHD13Q7L211 337 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TMEM173Q86WV6 379 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 ZNF440Q8IYI8 595 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CIPCQ9C0C6 399 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 ZDHHC6Q9H6R6 413 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 LMAN1LQ9HAT1 526 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 NOX3Q9HBY0 568 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 GPRIN2O60269 458 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 MAFO75444 373 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 EGFP01133 1207 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 ALDOAP04075 364 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 HRGP04196 525 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 ITGA5P08648 1049 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CPN1P15169 458 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 LRRC26Q2I0M4 334 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 C3orf38Q5JPI3 329 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 NRARPQ7Z6K4 114 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 PPP1R3BQ86XI6 285 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CMTM1Q8IZ96 169 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 NFKBIDQ8NI38 313 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 NSMAFQ92636 917 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SPNS1Q9H2V7 528 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CERS4Q9HA82 394 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 PLCXD1Q9NUJ7 323 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 DCAF13Q9NV06 445 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 IMP3Q9NV31 184 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 KLHL13Q9P2N7 655 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 PCDHB10Q9UN67 800 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 OSMP13725 252 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 GIFP27352 417 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 HBG1P69891 147 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 HBG2P69892 147 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 EMX1Q04741 257 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 C6orf136Q5SQH8 315 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SPRED1Q7Z699 444 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TMPRSS12Q86WS5 348 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 OR13C2Q8NGS9 318 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 RNF150Q9ULK6 438 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 A0A0G2JN53 185 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CACNB4O00305 520 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 SRPX2O60687 465 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 STAG3L2P0CL84 134 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 ZBTB48P10074 688 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 SPP1P10451 314 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 IL12BP29460 328 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TCTE1Q5JU00 501 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TOR2AQ5JU69 321 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 KCTD13Q8WZ19 329 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 C14orf79Q96F83 325 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TECTBQ96PL2 329 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SEMA4CQ9C0C4 833 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 B3GAT2Q9NPZ5 323 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 PCDH8O95206 1070 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TFPIP10646 304 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 FGF7P21781 194 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SPATA31A3Q5VYP0 1347 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 OR6C75A6NL08 312 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 RECQL4O94761 1208 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CDK14O94921 469 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CPNE6O95741 557 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 HLA-AP01891 365 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 SCG5P05408 212 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 G6PDP11413 515 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 OR8S1Q8NH09 359 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 METTL17Q9H7H0 456 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 SCML2Q9UQR0 700 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 ACTL7AQ9Y615 435 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 MEN1O00255 615 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CD9P21926 228 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 PER3P56645 1201 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 GTDC1Q4AE62 458 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 TNFAIP8L2Q6P589 184 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 TGIF2Q9GZN2 237 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 KIAA1522Q9P206 1035 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 WDR45Q9Y484 360 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CACNG3O60359 315 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 MAT2AP31153 395 aaKnown RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 ZNF705AQ6ZN79 300 aaPredicted RBP8.38□□□□□ -1.07
TTC28-208ENST00000612946 TMEM18Q96B42 140 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 SLC22A18Q96BI1 424 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 CCM2Q9BSQ5 444 aa8.38□□□□□ -1.07
TTC28-208ENST00000612946 AGRPO00253 132 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 BACE1P56817 501 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms