RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 HSPBAP1Q96EW2 488 aa13.19□□□□□ -0.3
CTSA-219ENST00000607841 THOC1Q96FV9 657 aaKnown RBP13.19□□□□□ -0.3
CTSA-219ENST00000607841 LCORQ96JN0 433 aaPredicted RBP13.19□□□□□ -0.3
CTSA-219ENST00000607841 SGCZQ96LD1 299 aa13.19□□□□□ -0.3
CTSA-219ENST00000607841 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
CTSA-219ENST00000607841 FGFR1OP2Q9NVK5 253 aa13.19□□□□□ -0.3
CTSA-219ENST00000607841 CSAG2Q9Y5P2 127 aa13.19□□□□□ -0.3
CTSA-219ENST00000607841 SMG1Q96Q15 3661 aaKnown RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 TTC36A6NLP5 189 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 TTLL8A6PVC2 850 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 EMC8O43402 210 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SUV39H1O43463 412 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SLC25A12O75746 678 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 NEURL1O76050 574 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 OR6B1O95007 311 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 IL6P05231 212 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SP1P08047 785 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SOX3P41225 446 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 MRPL19P49406 292 aaKnown RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 TMED10P49755 219 aaKnown RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 CDK9P50750 372 aaKnown RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 ZNHIT3Q15649 155 aaPredicted RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 INAQ16352 499 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 FAM174BQ3ZCQ3 159 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 ZNF766Q5HY98 468 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 ZNF468Q5VIY5 522 aaPredicted RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 METTL21CQ5VZV1 264 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 OR4F3Q6IEY1 312 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SLC25A25Q6KCM7 469 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 BHLHB9Q6PI77 547 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 IL20RBQ6UXL0 311 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 TMEM64Q6YI46 380 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SIMC1Q8NDZ2 872 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 RFWD2Q8NHY2 731 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 PSMA8Q8TAA3 256 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 NUDT8Q8WV74 236 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 MOAP1Q96BY2 351 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 MARK4Q96L34 752 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 SIGLEC12Q96PQ1 595 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 RABEP2Q9H5N1 569 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 ANKRA2Q9H9E1 313 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 FOLH1BQ9HBA9 442 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 TIMMDC1Q9NPL8 285 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 FAM120CQ9NX05 1096 aaKnown RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 NTMQ9P121 344 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 GPR55Q9Y2T6 319 aaPredicted RBP13.18□□□□□ -0.3
CTSA-219ENST00000607841 SNX8Q9Y5X2 465 aa13.18□□□□□ -0.3
CTSA-219ENST00000607841 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 FRG2CA6NGY1 282 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 ERN1O75460 977 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 C1QL1O75973 258 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 SORBS2O94875 1100 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 PSMG1O95456 288 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 NADKO95544 446 aaPredicted RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 C6orf47O95873 294 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 PGRP06401 933 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 FBXO45P0C2W1 286 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 NAGAP17050 411 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 EFNA1P20827 205 aaPredicted RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 ST13P50502 369 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 ATP4BP51164 291 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 ARFIP2P53365 341 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 PRKAG1P54619 331 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 WNT3P56703 355 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 ZNF155Q12901 538 aaPredicted RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 SPDYE7PQ495Y7 208 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 VPS26BQ4G0F5 336 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 ZCCHC12Q6PEW1 402 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 SZRD1Q7Z422 152 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 Q8NA96 180 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 FAM98AQ8NCA5 519 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 SPACA9Q96E40 222 aaPredicted RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 CHMP6Q96FZ7 201 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 SCMH1Q96GD3 660 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 TEX37Q96LM6 180 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 VSTM2LQ96N03 204 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 MS4A4EQ96PG1 132 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 BTBD9Q96Q07 612 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 NXF5Q9H1B4 397 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 ZCCHC3Q9NUD5 404 aaKnown RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 MRGBPQ9NV56 204 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 DTX4Q9Y2E6 619 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 KLF13Q9Y2Y9 288 aaPredicted RBP13.17□□□□□ -0.3
CTSA-219ENST00000607841 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 NPFFR2Q9Y5X5 522 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 IGSF10Q6WRI0 2623 aa13.17□□□□□ -0.3
CTSA-219ENST00000607841 FAM234BA2RU67 622 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 TP53I11O14683 189 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 TO15178 435 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 SOX30O94993 753 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 RASAL1O95294 804 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 ABCB1P08183 1280 aaPredicted RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms