RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 POP1Q99575 1024 aaKnown RBP5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 EGFL8Q99944 293 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 TMEM106CQ9BVX2 250 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 SLITRK2Q9H156 845 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 NEUROG2Q9H2A3 272 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 ZNF395Q9H8N7 513 aaPredicted RBP5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 DZANK1Q9NVP4 752 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 DNMT3BQ9UBC3 853 aaKnown RBP5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 XPR1Q9UBH6 696 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 CRLS1Q9UJA2 301 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 DAPP1Q9UN19 280 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 BAIAP2Q9UQB8 552 aa5.5□□□□□ -1.53
COL4A3BP-207ENST00000604926 A0A1B0GTH6 734 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 A0A1W2PRX2 142 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 TMEM191CA6NGB0 347 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 GRID2O43424 1007 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SOX15O60248 233 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 RFPL2O75678 378 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 PAEPP09466 180 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 C8orf89P0DMQ9 161 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 IL1R2P27930 398 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 MARCKSP29966 332 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 COILP38432 576 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 BCAT1P54687 386 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CKAP4Q07065 602 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 P2RY14Q15391 338 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 PCK2Q16822 640 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ATAD3CQ5T2N8 411 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SH3PXD2AQ5TCZ1 1133 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 DCAF12L1Q5VU92 463 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 TMPRSS7Q7RTY8 843 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CATSPER3Q86XQ3 398 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ADGRG3Q86Y34 549 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 TMEM156Q8N614 296 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SIRT6Q8N6T7 355 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CHDHQ8NE62 594 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 OR2L2Q8NH16 312 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 HM13Q8TCT9 377 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 EXTL1Q92935 676 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ULK4Q96C45 1275 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SLC38A2Q96QD8 506 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 G6PC3Q9BUM1 346 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 TMED9Q9BVK6 235 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 BOCQ9BWV1 1114 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ALOXE3Q9BYJ1 711 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ING2Q9H160 280 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CALHM2Q9HA72 323 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 RAB18Q9NP72 206 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 RAD18Q9NS91 495 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 PIGVQ9NUD9 493 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 TMEM216Q9P0N5 145 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 DKK4Q9UBT3 224 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 IKZF3Q9UKT9 509 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CLEC4EQ9ULY5 219 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 YBX2Q9Y2T7 364 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 UBE2J1Q9Y385 318 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 COL4A6Q14031 1691 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SPEF2Q9C093 1822 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 FAM237BA0A1B0GVD1 139 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 MGAT4DA6NG13 374 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 WIPF3A6NGB9 483 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 OIP5O43482 229 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SSX4O60224 188 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ITGA5P08648 1049 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SLC10A3P09131 477 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SERPINA2P20848 420 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 AVPR1AP37288 418 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CEACAM6P40199 344 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 RPS16P62249 146 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 NTRK3Q16288 839 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 MEP1AQ16819 746 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SYT6Q5T7P8 510 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CST9LP1Q5W188 147 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ARCQ7LC44 396 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 C16orf71Q8IYS4 520 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 C19orf47Q8N9M1 422 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 OR5B17Q8NGF7 314 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 OR52B4Q8NGK2 314 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 DCPSQ96C86 337 aaKnown RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SLC41A3Q96GZ6 507 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 PPP3R2Q96LZ3 170 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ZNF512Q96ME7 567 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SLC46A1Q96NT5 459 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 NPAS2Q99743 824 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 GDF15Q99988 308 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 LRRC3Q9BY71 257 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ZNF350Q9GZX5 532 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 OR10A5Q9H207 317 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SEMA6AQ9H2E6 1030 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SLC38A1Q9H2H9 487 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 PLEKHA2Q9HB19 425 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 ZNF334Q9HCZ1 680 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 GTSE1Q9NYZ3 720 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 COL20A1Q9P218 1284 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 SMPXQ9UHP9 88 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 TSSC4Q9Y5U2 329 aaPredicted RBP5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 CDY1Q9Y6F8 540 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 A0A1W2PP64 1363 aa5.49□□□□□ -1.53
COL4A3BP-207ENST00000604926 A0A1B0GV72 72 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms