RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CCNYL2Q5T2Q4 361 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 MROH9Q5TGP6 573 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 FRG2Q64ET8 278 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 SPATA4Q8NEY3 305 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 TRPC4APQ8TEL6 797 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 WNT2BQ93097 391 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 LCORQ96JN0 433 aaPredicted RBP19.27■□□□□ 0.68
PNKP-212ENST00000599454 FRG2BQ96QU4 278 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 NTMT1Q9BV86 223 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 OR2B2Q9GZK3 357 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 RAB17Q9H0T7 212 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 PIGMQ9H3S5 423 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 NOL11Q9H8H0 719 aaKnown RBP19.27■□□□□ 0.68
PNKP-212ENST00000599454 TMCO1Q9UM00 188 aa19.27■□□□□ 0.68
PNKP-212ENST00000599454 EXO1Q9UQ84 846 aaKnown RBP19.27■□□□□ 0.68
PNKP-212ENST00000599454 A0A096LPK6 155 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 C1orf226A1L170 272 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 H0Y3Z8 333 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 OR7A17O14581 309 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 ICOSLGO75144 302 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 SIX3O95343 332 aaPredicted RBP19.26■□□□□ 0.67
PNKP-212ENST00000599454 ATP1B1P05026 303 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 KLK1P06870 262 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 SLCO1A2P46721 670 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 CPA2P48052 419 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 LTBQ06643 244 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 PLCXD2Q0VAA5 305 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 IFT88Q13099 833 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 GAB1Q13480 694 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 PRICKLE4Q2TBC4 344 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 SHEQ5VZ18 495 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 TTC19Q6DKK2 380 aaPredicted RBP19.26■□□□□ 0.67
PNKP-212ENST00000599454 SLC48A1Q6P1K1 146 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 ADGRE4PQ86SQ3 457 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 FBXO25Q8TCJ0 367 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 OMA1Q96E52 524 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 GPR78Q96P69 363 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 TUBA1CQ9BQE3 449 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 ITPAQ9BY32 194 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 BRINP2Q9C0B6 783 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 GALNT8Q9NY28 637 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 KLRF1Q9NZS2 232 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 BCAP29Q9UHQ4 241 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 DTX4Q9Y2E6 619 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 PCDHA9Q9Y5H5 950 aa19.26■□□□□ 0.67
PNKP-212ENST00000599454 SH3D21A4FU49 640 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 CD53P19397 219 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 CSNK2A2P19784 350 aaPredicted RBP19.25■□□□□ 0.67
PNKP-212ENST00000599454 CHMP24386 653 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 DEKP35659 375 aaKnown RBP19.25■□□□□ 0.67
PNKP-212ENST00000599454 PTGDSP41222 190 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 MAPK12P53778 367 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 DIO3P55073 304 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 GUCY2DQ02846 1103 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 FOXF2Q12947 444 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 NNATQ16517 81 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 TECRLQ5HYJ1 363 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 METTL4Q8N3J2 472 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 OR52B6Q8NGF0 335 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 OR14L1PQ8NHC6 308 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 CDK15Q96Q40 435 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 NODALQ96S42 347 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 LRRC1Q9BTT6 524 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 MRPL1Q9BYD6 325 aaKnown RBP19.25■□□□□ 0.67
PNKP-212ENST00000599454 SERHLQ9NQF3 203 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 MAT2BQ9NZL9 334 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 PRODH2Q9UF12 536 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 ZNF639Q9UID6 485 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 CES1P1Q9UKY3 287 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 PSME2Q9UL46 239 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 MAPRE3Q9UPY8 281 aa19.25■□□□□ 0.67
PNKP-212ENST00000599454 DSCAMO60469 2012 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 HMX2A2RU54 273 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 CASKO14936 926 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 INHBBP09529 407 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 TYK2P29597 1187 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 ADSLP30566 484 aaPredicted RBP19.24■□□□□ 0.67
PNKP-212ENST00000599454 SOX18P35713 384 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 SERPINB8P50452 374 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 MGAT2Q10469 447 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 GGTA1PQ4G0N0 100 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 FAM111BQ6SJ93 734 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 IFNEQ86WN2 208 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 TRIM42Q8IWZ5 723 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 PTGR2Q8N8N7 351 aaPredicted RBP19.24■□□□□ 0.67
PNKP-212ENST00000599454 CTHRC1Q96CG8 243 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 GALNT9Q9HCQ5 603 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 CLCF1Q9UBD9 225 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 NDRG3Q9UGV2 375 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 HEATR5AQ86XA9 2040 aa19.24■□□□□ 0.67
PNKP-212ENST00000599454 PRAMEF25A6NGN4 478 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 FAM171A2A8MVW0 826 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 STX16-NPEPL1H3BU86 382 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 STX16O14662 325 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 TO15178 435 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 UGT2B11O75310 529 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 RBP1P09455 135 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 DRD5P21918 477 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 PPICP45877 212 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 PCYT1AP49585 367 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms