RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MED30Q96HR3 178 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 PINK1Q9BXM7 581 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 SAP130Q9H0E3 1048 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 OR51I1Q9H343 314 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 ANKRD19PQ9H560 264 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 MED17Q9NVC6 651 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 CARD8Q9Y2G2 431 aa12.49□□□□□ -0.41
VRK3-209ENST00000594948 YARS2Q9Y2Z4 477 aaKnown RBP12.49□□□□□ -0.41
VRK3-209ENST00000594948 PRAMEF27A3QJZ7 478 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 M0R3H8 397 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SYT5O00445 386 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 LILRB3O75022 631 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 PAPLNO95428 1278 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 HLA-DPB1P04440 258 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 NR2F1P10589 423 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 DRD2P14416 443 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 DDX6P26196 483 aaKnown RBP eCLIP12.48□□□□□ -0.41
VRK3-209ENST00000594948 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 SP3Q02447 781 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TSPAN31Q12999 210 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 RPA4Q13156 261 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 GPR162Q16538 588 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SYPL1Q16563 259 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 CCDC58Q4VC31 144 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TMEM215Q68D42 235 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 RASSF6Q6ZTQ3 369 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 UTS2BQ765I0 119 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TRMT11Q7Z4G4 463 aaKnown RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 DCUN1D3Q8IWE4 304 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SYT14Q8NB59 555 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TMEM145Q8NBT3 493 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 VN1R2Q8NFZ6 395 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 OR52N1Q8NH53 320 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SUN3Q8TAQ9 357 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SFXN5Q8TD22 340 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 UBL7Q96S82 380 aaPredicted RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 WFDC6Q9BQY6 131 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 BTBD1Q9H0C5 482 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 MRPL39Q9NYK5 338 aaKnown RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 A0A0G2JPF8 293 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 FAM240BA0A1B0GVZ2 78 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 HNRNPCL2B2RXH8 293 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 HNRNPCL3B7ZW38 293 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 ERVH48-1M5A8F1 160 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 KIAA0355O15063 1070 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 NDUFB5O43674 189 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 AKAP8O43823 692 aaKnown RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 VEGFDO43915 354 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 HNRNPCL4P0DMR1 293 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 OR12D1P0DN82 309 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 PSKH1P11801 424 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TYRP14679 529 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SYN1P17600 705 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SLC1A3P43003 542 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 MAB21L1Q13394 359 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 WSCD2Q2TBF2 565 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
VRK3-209ENST00000594948 AUTS2Q8WXX7 1259 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 RGMAQ96B86 450 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 CREB3L1Q96BA8 519 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SCLYQ96I15 445 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 F2RL3Q96RI0 385 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 GPA33Q99795 319 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 OR2AG1Q9H205 316 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 OR52A5Q9H2C5 316 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 TOR4AQ9NXH8 423 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 COMMD3Q9UBI1 195 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
VRK3-209ENST00000594948 NDUFS4O43181 175 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 TGM5O43548 720 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 HPGDSO60760 199 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 EPPINO95925 133 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 IGHA1P01876 353 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 FGBP02675 491 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 SLC6A11P48066 632 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 P2RX3P56373 397 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 ABATP80404 500 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 BDH1Q02338 343 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 DPTQ07507 201 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 TRAM2Q15035 370 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 BICRALQ6AI39 1079 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 COMTD1Q86VU5 262 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 KLHL36Q8N4N3 616 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 OR6T1Q8NGN1 323 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 DNAJA4Q8WW22 397 aaPredicted RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 SMG7Q92540 1137 aaKnown RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 EXOSC8Q96B26 276 aaKnown RBP12.47□□□□□ -0.41
VRK3-209ENST00000594948 MOAP1Q96BY2 351 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
VRK3-209ENST00000594948 SMG9Q9H0W8 520 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms