RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 PCDHGA12O60330 932 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 E2F6O75461 281 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 GABARAPO95166 117 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 GPC1P35052 558 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 NCBP2P52298 156 aaKnown RBP eCLIP18.29■□□□□ 0.521e-14■□□□□ 8.7
SPHK1-207ENST00000590959 VEZF1Q14119 521 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 PRTGQ2VWP7 1150 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 AMZ1Q400G9 498 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 ENPP6Q6UWR7 440 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 SVOPQ8N4V2 548 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 Q8N9G6 341 aaPredicted RBP18.29■□□□□ 0.52
SPHK1-207ENST00000590959 NETO1Q8TDF5 533 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 CNRIP1Q96F85 164 aaPredicted RBP18.29■□□□□ 0.52
SPHK1-207ENST00000590959 EDEM2Q9BV94 578 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 PRDM9Q9NQV7 894 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 ZNF780BQ9Y6R6 833 aa18.29■□□□□ 0.52
SPHK1-207ENST00000590959 RP1P56715 2156 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 CASC3O15234 703 aaKnown RBP18.28■□□□□ 0.52
SPHK1-207ENST00000590959 SIGLEC6O43699 453 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 IL7RP16871 459 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 MAGEA2P43356 314 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 SPDYE7PQ495Y7 208 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 COX20Q5RI15 118 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 PRR23CQ6ZRP0 262 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 PRSS41Q7RTY9 318 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 RNF130Q86XS8 419 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 PYURFQ96I23 114 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 SIRT3Q9NTG7 399 aaPredicted RBP18.28■□□□□ 0.52
SPHK1-207ENST00000590959 SCN3BQ9NY72 215 aa18.28■□□□□ 0.52
SPHK1-207ENST00000590959 ZNF292O60281 2723 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 LY6G6EA0A0G2JKS1 128 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 ZNF860A6NHJ4 632 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 TMX2-CTNND1H3BSU7 103 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 HS6ST1O60243 411 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 BCAS1O75363 584 aaPredicted RBP18.27■□□□□ 0.52
SPHK1-207ENST00000590959 PRKD3O94806 890 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 NUDT7P0C024 238 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 CSNK2A2P19784 350 aaPredicted RBP18.27■□□□□ 0.52
SPHK1-207ENST00000590959 PCMT1P22061 227 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 CD1CP29017 333 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 MPIP34949 423 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 GABRA4P48169 554 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 OLR1P78380 273 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 NR0B2Q15466 257 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 CEBPEQ15744 281 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 NDUFA9Q16795 377 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 DGUOKQ16854 277 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 DBX2Q6ZNG2 339 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 SAMD14Q8IZD0 417 aaPredicted RBP18.27■□□□□ 0.52
SPHK1-207ENST00000590959 ARHGEF39Q8N4T4 335 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 C11orf65Q8NCR3 313 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 RORBQ92753 470 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 NEURL3Q96EH8 262 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 SH3YL1Q96HL8 342 aaPredicted RBP18.27■□□□□ 0.52
SPHK1-207ENST00000590959 ZNF285Q96NJ3 590 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 MROQ9BYG7 248 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 EPS8L2Q9H6S3 715 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 SMURF2Q9HAU4 748 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 MAP4K5Q9Y4K4 846 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 U3KQA8 63 aa18.27■□□□□ 0.52
SPHK1-207ENST00000590959 BCKDKO14874 412 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 SERPINA1P01009 418 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CTSBP07858 339 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 ETFAP13804 333 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 PNLIPP16233 465 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CCT3P49368 545 aaKnown RBP18.26■□□□□ 0.51
SPHK1-207ENST00000590959 SKP1P63208 163 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CSNK2BP67870 215 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 MEP1AQ16819 746 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 TRIM16LQ309B1 348 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 TCTE1Q5JU00 501 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 GCNT6Q5T4J0 391 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 SAXO2Q658L1 398 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 SLC16A12Q6ZSM3 486 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 SUN3Q8TAQ9 357 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CCDC74AQ96AQ1 378 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 C10orf90Q96M02 699 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 APOL4Q9BPW4 351 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 MN1Q10571 1320 aaPredicted RBP18.26■□□□□ 0.51
SPHK1-207ENST00000590959 LRP3O75074 770 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 DNAJB6O75190 326 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 TNFRSF21O75509 655 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 HTR1AP08908 422 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 PCGF2P35227 344 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 FEN1P39748 380 aaKnown RBP18.26■□□□□ 0.51
SPHK1-207ENST00000590959 PRIM2P49643 509 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 PSMD7P51665 324 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CASP9P55211 416 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 HSD11B2P80365 405 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CFHR1Q03591 330 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 RBBP4Q09028 425 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 WDR74Q6RFH5 385 aaPredicted RBP18.26■□□□□ 0.51
SPHK1-207ENST00000590959 USP53Q70EK8 1073 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CCDC116Q8IYX3 515 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 TMCO5AQ8N6Q1 288 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 FAM181AQ8N9Y4 354 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 CSF3RQ99062 836 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 TMEM121BQ9BXQ6 578 aaPredicted RBP18.26■□□□□ 0.51
SPHK1-207ENST00000590959 TMEM38AQ9H6F2 299 aa18.26■□□□□ 0.51
SPHK1-207ENST00000590959 SEMA3GQ9NS98 782 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms