RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CTHRC1Q96CG8 243 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 ZFP3Q96NJ6 502 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 SERPINI1Q99574 410 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 RBM24Q9BX46 236 aaKnown RBP16.75■□□□□ 0.27
CCDC43-204ENST00000588687 OSBPL11Q9BXB4 747 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 MRPL1Q9BYD6 325 aaKnown RBP16.75■□□□□ 0.27
CCDC43-204ENST00000588687 METTL7AQ9H8H3 244 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 BEX4Q9NWD9 120 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-204ENST00000588687 RNF14Q9UBS8 474 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 ADAM29Q9UKF5 820 aa16.75■□□□□ 0.27
CCDC43-204ENST00000588687 RAI1Q7Z5J4 1906 aaPredicted RBP16.74■□□□□ 0.27
CCDC43-204ENST00000588687 SIAH2O43255 324 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 ICOSLGO75144 302 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 UGT2B11O75310 529 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 RCBTB2O95199 551 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 CLDN9O95484 217 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 CBX7O95931 251 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 ALDOAP04075 364 aaKnown RBP16.74■□□□□ 0.27
CCDC43-204ENST00000588687 INHBBP09529 407 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 NT5EP21589 574 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 PAFAH1B1P43034 410 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 SNTA1Q13424 505 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 RCAN2Q14206 197 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 TOMM20Q15388 145 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 TRADDQ15628 312 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 FAM83EQ2M2I3 478 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 TECRLQ5HYJ1 363 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 FBXW10Q5XX13 1052 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 FRG2Q64ET8 278 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 SLC30A6Q6NXT4 461 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 SLC48A1Q6P1K1 146 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 FAM111BQ6SJ93 734 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 OMA1Q96E52 524 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 FRG2BQ96QU4 278 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 YIPF4Q9BSR8 244 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 ZBTB26Q9HCK0 441 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 SERHLQ9NQF3 203 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 MAPRE3Q9UPY8 281 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 TESMINQ9Y4I5 508 aa16.74■□□□□ 0.27
CCDC43-204ENST00000588687 ARID1AO14497 2285 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 A0A1B0GTL3 188 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 SH3D21A4FU49 640 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 C2orf72A6NCS6 295 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 ERN1O75460 977 aaKnown RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 TNFSF13O75888 250 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 KLHL2O95198 593 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 KLK1P06870 262 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 CYP4B1P13584 511 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 PORP16435 677 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 CNTFP26441 200 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 MAGEA4P43358 317 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 LHX2P50458 406 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 MAP4K2Q12851 820 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 EXOSC7Q15024 291 aaKnown RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 MROH9Q5TGP6 573 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 FAM219BQ5XKK7 198 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 LUZP2Q86TE4 346 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 SPATA4Q8NEY3 305 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 RNF138Q8WVD3 245 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 ISL2Q96A47 359 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 NSUN5Q96P11 429 aaKnown RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 NOL11Q9H8H0 719 aaKnown RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 NEUROD4Q9HD90 331 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 EHD3Q9NZN3 535 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 PCTPQ9UKL6 214 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 EXO1Q9UQ84 846 aaKnown RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 PLLPQ9Y342 182 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 PCDHA9Q9Y5H5 950 aa16.73■□□□□ 0.27
CCDC43-204ENST00000588687 TNPO3Q9Y5L0 923 aaKnown RBP16.73■□□□□ 0.27
CCDC43-204ENST00000588687 PRAMEF25A6NGN4 478 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 ACOX3O15254 700 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 HCRTR2O43614 444 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 PLCXD2Q0VAA5 305 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 GALNT1Q10472 559 aaPredicted RBP16.72■□□□□ 0.27
CCDC43-204ENST00000588687 UBAP2Q5T6F2 1119 aaKnown RBP16.72■□□□□ 0.27
CCDC43-204ENST00000588687 NUP54Q7Z3B4 507 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 COMMD6Q7Z4G1 85 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 GCNT2Q8N0V5 402 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 PLD6Q8N2A8 252 aaKnown RBP16.72■□□□□ 0.27
CCDC43-204ENST00000588687 METTL4Q8N3J2 472 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 WNT2BQ93097 391 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 LCORQ96JN0 433 aaPredicted RBP16.72■□□□□ 0.27
CCDC43-204ENST00000588687 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 TM9SF2Q99805 663 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 NTMT1Q9BV86 223 aa16.72■□□□□ 0.27
CCDC43-204ENST00000588687 CPSF2Q9P2I0 782 aaKnown RBP16.72■□□□□ 0.27
CCDC43-204ENST00000588687 A0A096LPK6 155 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 A8MXE2 369 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 H0Y3Z8 333 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 TO15178 435 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 HEXAP06865 529 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 KRT15P19012 456 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 CCKARP32238 428 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 EMDP50402 254 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 PLTPP55058 493 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 CLDN18P56856 261 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 NKX6-1P78426 367 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-204ENST00000588687 C2orf54Q08AI8 447 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 LTB4RQ15722 352 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms