RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NUP43Q8NFH3 380 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 RIT1Q92963 219 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 CCDC124Q96CT7 223 aaKnown RBP13.9□□□□□ -0.18
NFIX-208ENST00000587260 GIMAP5Q96F15 307 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
NFIX-208ENST00000587260 FAM117AQ9C073 453 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 DENND2DQ9H6A0 471 aaPredicted RBP13.9□□□□□ -0.18
NFIX-208ENST00000587260 TMEM38AQ9H6F2 299 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 CCDC86Q9H6F5 360 aaKnown RBP13.9□□□□□ -0.18
NFIX-208ENST00000587260 THUMPD1Q9NXG2 353 aaKnown RBP13.9□□□□□ -0.18
NFIX-208ENST00000587260 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.18
NFIX-208ENST00000587260 CELSR3Q9NYQ7 3312 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 CEP295Q9C0D2 2601 aa13.9□□□□□ -0.18
NFIX-208ENST00000587260 ELOVL7A1L3X0 281 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 KLK10O43240 276 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 CREG1O75629 220 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 TCN1P20061 433 aaPredicted RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 MMP11P24347 488 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 ACTR3P61158 418 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 FUT7Q11130 342 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 TP53BP2Q13625 1128 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 TRMT12Q53H54 448 aaKnown RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 COX20Q5RI15 118 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 EXOSC6Q5RKV6 272 aaKnown RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 ZCCHC12Q6PEW1 402 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 PAPD4Q6PIY7 484 aaKnown RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 CPEB2Q7Z5Q1 589 aaKnown RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 IFNEQ86WN2 208 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 PTOV1Q86YD1 416 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 MICU2Q8IYU8 434 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 VWA5B2Q8N398 1253 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 SIMC1Q8NDZ2 872 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 PTPMT1Q8WUK0 201 aaPredicted RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 WDR60Q8WVS4 1066 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 HOXB13Q92826 284 aaPredicted RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 GATA6Q92908 595 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 MS4A4EQ96PG1 132 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 DDX18Q9NVP1 670 aaKnown RBP13.9□□□□□ -0.19
NFIX-208ENST00000587260 ERVK-19Q9WJR5 959 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 CLCA3PQ9Y6N3 262 aa13.9□□□□□ -0.19
NFIX-208ENST00000587260 FRYQ5TBA9 3013 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 SOCS6O14544 535 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 IGHEP01854 428 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 HMGN2P05204 90 aaKnown RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 WT1P19544 449 aaPredicted RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 CRATP43155 626 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 RBBP4Q09028 425 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 VEZF1Q14119 521 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 ZNF267Q14586 743 aaPredicted RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 SSPNQ14714 243 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 EXOSC7Q15024 291 aaKnown RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 VMACQ2NL98 169 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 ZZZ3Q8IYH5 903 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 SNIP1Q8TAD8 396 aaKnown RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 SLC35G5Q96KT7 338 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 WDR77Q9BQA1 342 aaPredicted RBP13.89□□□□□ -0.19
NFIX-208ENST00000587260 OR8D2Q9GZM6 311 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 SERHL2Q9H4I8 314 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 ACTR3BQ9P1U1 418 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
NFIX-208ENST00000587260 LOC102723996A0A087X1L8 192 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 CDC14CA4D256 554 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 SAGE2PA6NJ88 616 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 PCDH17O14917 1159 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 ASNA1O43681 348 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 NME6O75414 186 aaPredicted RBP13.88□□□□□ -0.19
NFIX-208ENST00000587260 SOX30O94993 753 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 CBX7O95931 251 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 PRKAR1AP10644 381 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 COX6A1P12074 109 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 ETFAP13804 333 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 GGT1P19440 569 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 MATN1P21941 496 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 SSTR4P31391 388 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 MAP3K8P41279 467 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 MAN2A2P49641 1150 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 ANXA11P50995 505 aaKnown RBP13.88□□□□□ -0.19
NFIX-208ENST00000587260 PRKAG1P54619 331 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 ATP1A4Q13733 1029 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 PCOLCEQ15113 449 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 CYP51A1Q16850 503 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 LCN8Q6JVE9 175 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 MFSD12Q6NUT3 480 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 KIRREL2Q6UWL6 708 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 ANGPTL8Q6UXH0 198 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 MRGPREQ86SM8 312 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 DHFR2Q86XF0 187 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 PROSER1Q86XN7 944 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 RAB43Q86YS6 212 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 LGI4Q8N135 537 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 HORMAD2Q8N7B1 307 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 ZNF321PQ8N8H1 164 aa13.88□□□□□ -0.19
NFIX-208ENST00000587260 OR7G1Q8NGA0 311 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms