RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CCDC115Q96NT0 180 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 BTBD9Q96Q07 612 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 OR52E6Q96RD3 313 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 RASL10BQ96S79 203 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 ZNF385DQ9H6B1 395 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 TRIM45Q9H8W5 580 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-204ENST00000586558 SIRT3Q9NTG7 399 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-204ENST00000586558 BTNL2Q9UIR0 455 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 FAM208BQ5VWN6 2430 aa17.74■□□□□ 0.43
DDX39A-204ENST00000586558 C9JVG2 144 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 ACOX3O15254 700 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 DRD4P21917 467 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 DRD5P21918 477 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 ZFP36L2P47974 494 aaKnown RBP17.73■□□□□ 0.43
DDX39A-204ENST00000586558 HBA1P69905 142 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 TUBA3CQ13748 450 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 SPDYE7PQ495Y7 208 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 TUBA3EQ6PEY2 450 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 BHLHB9Q6PI77 547 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 BLOC1S3Q6QNY0 202 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 DND1Q8IYX4 353 aaKnown RBP17.73■□□□□ 0.43
DDX39A-204ENST00000586558 CLECL1Q8IZS7 167 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 TMEM156Q8N614 296 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 CPSF7Q8N684 471 aaKnown RBP17.73■□□□□ 0.43
DDX39A-204ENST00000586558 HORMAD2Q8N7B1 307 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 OR56A1Q8NGH5 318 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 MAGED4Q96JG8 741 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 LCORQ96JN0 433 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-204ENST00000586558 MS4A4EQ96PG1 132 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 ITPAQ9BY32 194 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 RMND5AQ9H871 391 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 ANKRA2Q9H9E1 313 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 FOLH1BQ9HBA9 442 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 DTX4Q9Y2E6 619 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 SNX8Q9Y5X2 465 aa17.73■□□□□ 0.43
DDX39A-204ENST00000586558 CPAMD8Q8IZJ3 1885 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 FRG2CA6NGY1 282 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ERN1O75460 977 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 CCT3P49368 545 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 CYB561P49447 251 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 TNFSF10P50591 281 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 NRG3P56975 720 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 KCNK10P57789 538 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 OC90Q02509 493 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ZNF155Q12901 538 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 TLR1Q15399 786 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ZNHIT3Q15649 155 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 VPS26BQ4G0F5 336 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 TIGD2Q4W5G0 525 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 C16orf47Q6ZP98 133 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 Q6ZS92 163 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ANKRD46Q86W74 232 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 RBMXL3Q8N7X1 1067 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 NUP43Q8NFH3 380 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 OR4A15Q8NGL6 344 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 GOT1L1Q8NHS2 421 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ASB15Q8WXK1 588 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 SLC39A7Q92504 469 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 FAM120BQ96EK7 910 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 HSPBAP1Q96EW2 488 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ELAC2Q9BQ52 826 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 FAM107BQ9H098 131 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 NXF5Q9H1B4 397 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 CXorf36Q9H7Y0 433 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 LIN28AQ9H9Z2 209 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 ZCCHC3Q9NUD5 404 aaKnown RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 PLA2G3Q9NZ20 509 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 B3GNT3Q9Y2A9 372 aa17.72■□□□□ 0.43
DDX39A-204ENST00000586558 GPR55Q9Y2T6 319 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-204ENST00000586558 TRAV17A0A0B4J275 112 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 CAPN14A8MX76 684 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 NADKO95544 446 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-204ENST00000586558 ABCB1P08183 1280 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-204ENST00000586558 CD96P40200 585 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 CD97P48960 835 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 TMED10P49755 219 aaKnown RBP17.71■□□□□ 0.43
DDX39A-204ENST00000586558 NR0B1P51843 470 aaKnown RBP17.71■□□□□ 0.43
DDX39A-204ENST00000586558 KLRB1Q12918 225 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 AGKQ53H12 422 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 ZCCHC12Q6PEW1 402 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 SZRD1Q7Z422 152 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 FUNDC1Q8IVP5 155 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 TRIML2Q8N7C3 387 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 CDRT4Q8N9R6 151 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 TEX19Q8NA77 164 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 ITCHQ96J02 903 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.71■□□□□ 0.434e-7■□□□□ 10.9
DDX39A-204ENST00000586558 CCDC167Q9P0B6 97 aa17.71■□□□□ 0.43
DDX39A-204ENST00000586558 CCDC154A6NI56 674 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 A8MVJ9 347 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 TO15178 435 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 SNX3O60493 162 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 SOX30O94993 753 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 KRT16P08779 473 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 CT45A8P0DMV1 189 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 CT45A9P0DMV2 189 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 NAGAP17050 411 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 UQCRC2P22695 453 aa17.7■□□□□ 0.42
DDX39A-204ENST00000586558 ADSLP30566 484 aaPredicted RBP17.7■□□□□ 0.42
DDX39A-204ENST00000586558 SOAT1P35610 550 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms