RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 FAM111BQ6SJ93 734 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 ANGPTL8Q6UXH0 198 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
SDF2-202ENST00000585428 TRIM42Q8IWZ5 723 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 SIMC1Q8NDZ2 872 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 SMPDL3BQ92485 455 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 ARSGQ96EG1 525 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 TM9SF2Q99805 663 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 NTMT1Q9BV86 223 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 SFXN3Q9BWM7 321 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 NOL11Q9H8H0 719 aaKnown RBP13.16□□□□□ -0.3
SDF2-202ENST00000585428 METTL7AQ9H8H3 244 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 GALNT8Q9NY28 637 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 MPDZO75970 2070 aa13.16□□□□□ -0.3
SDF2-202ENST00000585428 A8MXE2 369 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 ERN1O75460 977 aaKnown RBP13.15□□□□□ -0.3
SDF2-202ENST00000585428 ATP1B1P05026 303 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 KRT15P19012 456 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 NT5EP21589 574 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 STX2P32856 288 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 PLTPP55058 493 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 NAB1Q13506 487 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 TRADDQ15628 312 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 CCNYL2Q5T2Q4 361 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 SHEQ5VZ18 495 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 FRG2Q64ET8 278 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 VWA5B2Q8N398 1253 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 OR52B6Q8NGF0 335 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 INTS12Q96CB8 462 aaKnown RBP13.15□□□□□ -0.3
SDF2-202ENST00000585428 OMA1Q96E52 524 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 LCORQ96JN0 433 aaPredicted RBP13.15□□□□□ -0.3
SDF2-202ENST00000585428 FRG2BQ96QU4 278 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 MRPL1Q9BYD6 325 aaKnown RBP13.15□□□□□ -0.3
SDF2-202ENST00000585428 OR2B2Q9GZK3 357 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 AHSPQ9NZD4 102 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 CFL2Q9Y281 166 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 MRPS18CQ9Y3D5 142 aaKnown RBP13.15□□□□□ -0.3
SDF2-202ENST00000585428 PCDHA9Q9Y5H5 950 aa13.15□□□□□ -0.3
SDF2-202ENST00000585428 ABCA2Q9BZC7 2435 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 A0A096LPK6 155 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 A0A1B0GTL3 188 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 SH3D21A4FU49 640 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 TO15178 435 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 ACOX3O15254 700 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 UGT2B11O75310 529 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 PPICP45877 212 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 PCYT1AP49585 367 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 STARP49675 285 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 EMDP50402 254 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 LHX2P50458 406 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 EEF1A1P68104 462 aaKnown RBP13.14□□□□□ -0.31
SDF2-202ENST00000585428 CAV1Q03135 178 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 SRYQ05066 204 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 GAB1Q13480 694 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 TRMT12Q53H54 448 aaKnown RBP13.14□□□□□ -0.31
SDF2-202ENST00000585428 C10orf62Q5T681 223 aaPredicted RBP13.14□□□□□ -0.31
SDF2-202ENST00000585428 EEF1A1P5Q5VTE0 462 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 ENPP6Q6UWR7 440 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 PLXDC2Q6UX71 529 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 PAGE2Q7Z2X7 111 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 LUZP2Q86TE4 346 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 FBXO25Q8TCJ0 367 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 ZNF681Q96N22 645 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 OSBPL11Q9BXB4 747 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 ITPAQ9BY32 194 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 PIGMQ9H3S5 423 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 ZBTB26Q9HCK0 441 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 SERHLQ9NQF3 203 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 MAT2BQ9NZL9 334 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 CLCF1Q9UBD9 225 aa13.14□□□□□ -0.31
SDF2-202ENST00000585428 DNHD1Q96M86 4753 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 C1orf226A1L170 272 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 CASKO14936 926 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 ZIC3O60481 467 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 TNFSF13O75888 250 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 CBX7O95931 251 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 ALDOAP04075 364 aaKnown RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 CSNK2A2P19784 350 aaPredicted RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 CHMP24386 653 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 FEN1P39748 380 aaKnown RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 DUSP2Q05923 314 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 EXOSC7Q15024 291 aaKnown RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 POU4F3Q15319 338 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 NNATQ16517 81 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 ZDHHC24Q6UX98 284 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
SDF2-202ENST00000585428 PLD6Q8N2A8 252 aaKnown RBP13.13□□□□□ -0.31
SDF2-202ENST00000585428 OR14L1PQ8NHC6 308 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms