RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CACNA1DQ01668 2161 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 NPIPA2E9PIF3 369 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 NPIPA3F8WFD2 350 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 RGS16O15492 202 aaPredicted RBP18.76■□□□□ 0.59
SS18-224ENST00000584083 CELA3AP09093 270 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 LINC00032P0C843 101 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 SOX18P35713 384 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 EMDP50402 254 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 DCAF7P61962 342 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 ARL13AQ5H913 290 aaPredicted RBP18.76■□□□□ 0.59
SS18-224ENST00000584083 TMEM198Q66K66 360 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 ZCCHC23Q6ZST2 131 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 TRILQ7L0X0 811 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 DDIASQ8IXT1 998 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 SPPL2AQ8TCT8 520 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 HSPBAP1Q96EW2 488 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 METTL2AQ96IZ6 378 aaKnown RBP18.76■□□□□ 0.59
SS18-224ENST00000584083 ZNF597Q96LX8 424 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 B4GALT7Q9UBV7 327 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 RAB21Q9UL25 225 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 TRAF6Q9Y4K3 522 aa18.76■□□□□ 0.59
SS18-224ENST00000584083 ANKRD33BA6NCL7 494 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 ADAM10O14672 748 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 ACOX3O15254 700 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 PPM1BO75688 479 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 IGHG3P01860 377 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 RFPL3SP0C7P2 107 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 NEFHP12036 1026 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 NAGAP17050 411 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 DRD5P21918 477 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 PRPH2P23942 346 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 PPICP45877 212 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 MAN2A2P49641 1150 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 ZNF844Q08AG5 666 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 KANK2Q63ZY3 851 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 BICRALQ6AI39 1079 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 HOMEZQ8IX15 550 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.75■□□□□ 0.59
SS18-224ENST00000584083 AGR3Q8TD06 166 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 ERP27Q96DN0 273 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 OMA1Q96E52 524 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 RILPQ96NA2 401 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 SECISBP2Q96T21 854 aaKnown RBP18.75■□□□□ 0.59
SS18-224ENST00000584083 TP63Q9H3D4 680 aaPredicted RBP18.75■□□□□ 0.59
SS18-224ENST00000584083 TUBB1Q9H4B7 451 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 DNAJC15Q9Y5T4 150 aa18.75■□□□□ 0.59
SS18-224ENST00000584083 TRGV5A0A0B4J1U4 118 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 LRRC3CA6NJW4 275 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 MYO1GB0I1T2 1018 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 TMEM233B4DJY2 109 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 SNX4O95219 450 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 JUNP05412 331 aaKnown RBP18.74■□□□□ 0.59
SS18-224ENST00000584083 TUBBP07437 444 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 ABCB1P08183 1280 aaPredicted RBP18.74■□□□□ 0.59
SS18-224ENST00000584083 FGF4P08620 206 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 NTSP30990 170 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 MASP1P48740 699 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 NCBP2P52298 156 aaKnown RBP eCLIP18.74■□□□□ 0.59
SS18-224ENST00000584083 PLCXD2Q0VAA5 305 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 KIAA0040Q15053 153 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 CEBPEQ15744 281 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 PRSS53Q2L4Q9 553 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 SP5Q6BEB4 398 aaPredicted RBP18.74■□□□□ 0.59
SS18-224ENST00000584083 Q6ZSR9 355 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 IKBIPQ70UQ0 350 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 NUP54Q7Z3B4 507 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 PACS2Q86VP3 889 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 CLYBLQ8N0X4 340 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 OR5M9Q8NGP3 310 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 OR2T11Q8NH01 316 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 PHF10Q8WUB8 498 aaKnown RBP18.74■□□□□ 0.59
SS18-224ENST00000584083 EGLN2Q96KS0 407 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 DMRTA2Q96SC8 542 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 ANGPTL4Q9BY76 406 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 CENPHQ9H3R5 247 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 ZNF703Q9H7S9 590 aaPredicted RBP18.74■□□□□ 0.59
SS18-224ENST00000584083 METTL7AQ9H8H3 244 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 TAS2R7Q9NYW3 318 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 HRH3Q9Y5N1 445 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 KLF2Q9Y5W3 355 aaPredicted RBP18.74■□□□□ 0.59
SS18-224ENST00000584083 MAST4O15021 2626 aa18.74■□□□□ 0.59
SS18-224ENST00000584083 PHF3Q92576 2039 aaKnown RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 A0A1B0GVC2 190 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 OR14I1A6ND48 311 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 FRG2CA6NGY1 282 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 NPIPB8E9PQR5 432 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 AQP7O14520 342 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 BCKDKO14874 412 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 CTIFO43310 598 aaKnown RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 TYROBPO43914 113 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 SUSD5O60279 629 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 PLOD3O60568 738 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 TRIM3O75382 744 aaPredicted RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 NME6O75414 186 aaPredicted RBP18.73■□□□□ 0.59
SS18-224ENST00000584083 BPGMP07738 259 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 AGAP20933 346 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 TACR1P25103 407 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 GDF1P27539 372 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 CASP3P42574 277 aa18.73■□□□□ 0.59
SS18-224ENST00000584083 GALNTL6Q49A17 601 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms