RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NDUFAF5Q5TEU4 345 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 GRHL2Q6ISB3 625 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 GDPD3Q7L5L3 318 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 OR5H6Q8NGV6 325 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 PPP1R14AQ96A00 147 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 TESCQ96BS2 214 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 AHCYL2Q96HN2 611 aaKnown RBP16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 CSF3RQ99062 836 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 NDUFAF4Q9P032 175 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 TEX13CA0A0J9YWL9 993 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 ASPDHA6ND91 283 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 SKP1P63208 163 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 SCRN3Q0VDG4 424 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 KCNC3Q14003 757 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 MANEALQ5VSG8 457 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 PAQR6Q6TCH4 344 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 GALNT7Q86SF2 657 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 FTMTQ8N4E7 242 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 OR52P1PQ8NH57 321 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 HRASLS5Q96KN8 279 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 EGLN3Q9H6Z9 239 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 ERVW-1Q9UQF0 538 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 MRPS33Q9Y291 106 aaKnown RBP16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 OR1A2Q9Y585 309 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 SPTBP11277 2137 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 SOBPA7XYQ1 873 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 PSMB5P28074 263 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 GIPRP48546 466 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 EIF4HQ15056 248 aaKnown RBP16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 TOMM20Q15388 145 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 FAM205BPQ63HN1 556 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 PROKR2Q8NFJ6 384 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 OR4K3Q96R72 315 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 GPER1Q99527 375 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 CENPMQ9NSP4 180 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 HCFC1R1Q9NWW0 138 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 MED11Q9P086 117 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 FARSAQ9Y285 508 aaKnown RBP16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 RPS19P39019 145 aaKnown RBP16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 TMEM44Q2T9K0 475 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 FLYWCH1Q4VC44 716 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 PODNL1Q6PEZ8 512 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 ARMC10Q8N2F6 343 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 SLC44A3Q8N4M1 653 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 C12orf76Q8N812 135 aaPredicted RBP16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 GDPD1Q8N9F7 314 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 WDR20Q8TBZ3 569 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 TRIB3Q96RU7 358 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 THSD1Q9NS62 852 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 PCDHGA6Q9Y5G7 932 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 PCDHGA4Q9Y5G9 962 aa16.97■□□□□ 0.31
ATPAF1-214ENST00000576409 SULT1C4O75897 302 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 HMGN2P05204 90 aaKnown RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 PEPDP12955 493 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF24P17028 368 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 MAGEA2P43356 314 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 CEBPGP53567 150 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 DUSP7Q16829 419 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 KDM4DQ6B0I6 523 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 RBM45Q8IUH3 476 aaKnown RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 SYNPOQ8N3V7 929 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 TRAM1L1Q8N609 369 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 HORMAD2Q8N7B1 307 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 FANK1Q8TC84 345 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 GNPDA2Q8TDQ7 276 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 CCDC115Q96NT0 180 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 SAP130Q9H0E3 1048 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 SLC6A15Q9H2J7 730 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 MAST2Q6P0Q8 1798 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 NPIPA5A0A0B4J1W7 369 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 OR2A25A4D2G3 310 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 NPIPA7E9PJI5 369 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 NPIPA8P0DM63 369 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 ADH5P11766 374 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 HOXC13P31276 330 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 TAF8Q7Z7C8 310 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 PUM1Q14671 1186 aaKnown RBP eCLIP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 ZC3H14Q6PJT7 736 aaKnown RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 XKRXQ6PP77 449 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 OR4K13Q8NH42 304 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 WBP2Q969T9 261 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF689Q96CS4 500 aaPredicted RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 HSPA12BQ96MM6 686 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 ZIC5Q96T25 663 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 CDADC1Q9BWV3 514 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 DPH1Q9BZG8 443 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 ARL6Q9H0F7 186 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 DDX31Q9H8H2 851 aaKnown RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 MKKSQ9NPJ1 570 aaPredicted RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 CKLFQ9UBR5 152 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 AK6Q9Y3D8 172 aaKnown RBP16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 PCDHGA2Q9Y5H1 932 aa16.96■□□□□ 0.31
ATPAF1-214ENST00000576409 C5orf51A6NDU8 294 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 LRRN3E7EW58 273 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 TYRP1P17643 537 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 GAB1Q13480 694 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 CASTOR1Q8WTX7 329 aa16.96■□□□□ 0.3
ATPAF1-214ENST00000576409 PDLIM5Q96HC4 596 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms