RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RAB40BQ12829 278 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 NAE1Q13564 534 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 ZSWIM7Q19AV6 140 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 ZNF791Q3KP31 576 aaPredicted RBP13.62□□□□□ -0.23
SMG6-215ENST00000574501 LYPLAL1Q5VWZ2 237 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SHEQ5VZ18 495 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 REEP3Q6NUK4 255 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 LINC00518Q8N0U6 118 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SAMD12Q8N8I0 201 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 OR7G3Q8NG95 312 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 OR4F15Q8NGB8 312 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 OR2T4Q8NH00 348 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SGTBQ96EQ0 304 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 OR2M2Q96R28 347 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 OR4K3Q96R72 315 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 ABHD1Q96SE0 405 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 SHARPINQ9H0F6 387 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 OSGEPL1Q9H4B0 414 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 EGLN3Q9H6Z9 239 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 PTTG3PQ9NZH4 202 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 CLEC4AQ9UMR7 237 aa13.62□□□□□ -0.23
SMG6-215ENST00000574501 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
SMG6-215ENST00000574501 HLA-DPB1P04440 258 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 PROS1P07225 676 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 CD3GP09693 182 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 GJA5P36382 358 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 SELENOPP49908 381 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 TPMTP51580 245 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 PODNL1Q6PEZ8 512 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
SMG6-215ENST00000574501 GIMAP1Q8WWP7 306 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 RAB8BQ92930 207 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 HGDQ93099 445 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 PPCDCQ96CD2 204 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 METTL17Q9H7H0 456 aaPredicted RBP13.61□□□□□ -0.23
SMG6-215ENST00000574501 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 STON1Q9Y6Q2 735 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 MEIKINA0A087WXM9 373 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 GPR37L1O60883 481 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 SLC1A3P43003 542 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 OR5M3Q8NGP4 307 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 SLC38A5Q8WUX1 472 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
SMG6-215ENST00000574501 FGF20Q9NP95 211 aaPredicted RBP13.61□□□□□ -0.23
SMG6-215ENST00000574501 SLAMF7Q9NQ25 335 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 IFT46Q9NQC8 304 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 CYSLTR2Q9NS75 346 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 NLGN3Q9NZ94 848 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 PRKAB1Q9Y478 270 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 HRH3Q9Y5N1 445 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 NUBP2Q9Y5Y2 271 aa13.61□□□□□ -0.23
SMG6-215ENST00000574501 A0A1W2PRB8 838 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 G3V3Q6 166 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 PRODHO43272 600 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SMAD6O43541 496 aaKnown RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 FURINP09958 794 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 PITPNBP48739 271 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ZP1P60852 638 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ZNF763Q0D2J5 394 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 CDKN3Q16667 212 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 GSG1Q2KHT4 349 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SLC36A2Q495M3 483 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 GPR33Q49SQ1 333 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 CCSMST1Q4G0I0 132 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 CLVS2Q5SYC1 327 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 IQCHQ86VS3 1027 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 STPG2Q8N412 459 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TTLQ8NG68 377 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 WDR48Q8TAF3 677 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 FGF11Q92914 225 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ART5Q96L15 291 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TEFMQ96QE5 360 aaKnown RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 SECISBP2Q96T21 854 aaKnown RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 ADAM2Q99965 735 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 CACNG6Q9BXT2 260 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 CHIAQ9BZP6 476 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ZDHHC3Q9NYG2 299 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 OR6C2Q9NZP2 312 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TMEM5Q9Y2B1 443 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SLC22A23A1A5C7 686 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 MFSD2BA6NFX1 497 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 H0YIV9 168 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 GFYI3L273 518 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 OAZ2O95190 189 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SULT1A3P0DMM9 295 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SULT1A4P0DMN0 295 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 DRD5P21918 477 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 LCN1P31025 176 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 CORO1AP31146 461 aaKnown RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 OR1G1P47890 313 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SLC6A11P48066 632 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TAS2R50P59544 299 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TSPAN5P62079 268 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 MAP4K2Q12851 820 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms