RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 UPK1AO00322 258 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 TO15178 435 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 SLC25A12O75746 678 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 BCAS2O75934 225 aaPredicted RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 TGDSO95455 350 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 CD46P15529 392 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 DRD5P21918 477 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 NTSP30990 170 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 PPICP45877 212 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 CDK9P50750 372 aaKnown RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 PHC1P78364 1004 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 OC90Q02509 493 aaPredicted RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 NTRK2Q16620 822 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 OPN5Q6U736 354 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 TMEM107Q6UX40 140 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 NPSR1Q6W5P4 371 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 SPATA19Q7Z5L4 167 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 CYP4Z2PQ8N1L4 340 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 HORMAD2Q8N7B1 307 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 GOLM1Q8NBJ4 401 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 OR8J2Q8NGG1 315 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 CPT1CQ8TCG5 803 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 DYDC1Q8WWB3 177 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 ASB15Q8WXK1 588 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 TESCQ96BS2 214 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 SPACA9Q96E40 222 aaPredicted RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 GIMAP5Q96F15 307 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 ZBED6CLQ96FA7 236 aaPredicted RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 SGCZQ96LD1 299 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 TEX37Q96LM6 180 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 GAL3ST4Q96RP7 486 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 SLX1AQ9BQ83 275 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 ITPAQ9BY32 194 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 BHLHE41Q9C0J9 482 aaPredicted RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 PRODH2Q9UF12 536 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 MAPRE3Q9UPY8 281 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 SVILO95425 2214 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 USP9XQ93008 2570 aaPredicted RBP11.45□□□□□ -0.58
RNF40-211ENST00000567365 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 EDF1O60869 148 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 NAGAP17050 411 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 IL12AP29459 219 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 ZFP36L2P47974 494 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 MRPL19P49406 292 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 IDH3AP50213 366 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 NR0B1P51843 470 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 TDGF1P3P51864 188 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 DCAF7P61962 342 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 PSG6Q00889 435 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 SRSF1Q07955 248 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNF40-211ENST00000567365 LSM12Q3MHD2 195 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 CPTPQ5TA50 214 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 C6orf163Q5TEZ5 329 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 IL20RBQ6UXL0 311 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 FAM47EQ6ZV65 393 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 GALNTL5Q7Z4T8 443 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 DND1Q8IYX4 353 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 NATD1Q8N6N6 113 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 TMEM178AQ8NBL3 297 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 PSD4Q8NDX1 1056 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 CEP70Q8NHQ1 597 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 SLC22A8Q8TCC7 542 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 GRHL3Q8TE85 626 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 PAQR8Q8TEZ7 354 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 RNF138Q8WVD3 245 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 LCORQ96JN0 433 aaPredicted RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 FRMD6Q96NE9 622 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 CCDC134Q9H6E4 229 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 FOLH1BQ9HBA9 442 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 BCAP29Q9UHQ4 241 aa11.44□□□□□ -0.58
RNF40-211ENST00000567365 COPG1Q9Y678 874 aaKnown RBP11.44□□□□□ -0.58
RNF40-211ENST00000567365 FRG2CA6NGY1 282 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 A8MVJ9 347 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 ACOX3O15254 700 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 WISP2O76076 250 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 CCL3P10147 92 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 EFNA1P20827 205 aaPredicted RBP11.43□□□□□ -0.58
RNF40-211ENST00000567365 ABCD3P28288 659 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 MANFP55145 182 aaKnown RBP11.43□□□□□ -0.58
RNF40-211ENST00000567365 CORO7P57737 925 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 UFM1P61960 85 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 PMP22Q01453 160 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 HSPB3Q12988 150 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 RNFT1Q5M7Z0 435 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 TMEM198Q66K66 360 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 TMEM81Q6P7N7 255 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 TMEM64Q6YI46 380 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 RTL4Q6ZR62 310 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 SIAH3Q8IW03 269 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 TAGAPQ8N103 731 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 ARFGAP2Q8N6H7 521 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 ZFP62Q8NB50 900 aaPredicted RBP11.43□□□□□ -0.58
RNF40-211ENST00000567365 DNAJB8Q8NHS0 232 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 ZFP28Q8NHY6 868 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 FAR1Q8WVX9 515 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 OR5P2Q8WZ92 322 aa11.43□□□□□ -0.58
RNF40-211ENST00000567365 HSPBAP1Q96EW2 488 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms