RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 HCN1O60741 890 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 PPM1BO75688 479 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 ABCB1P08183 1280 aaPredicted RBP18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 NUP107P57740 925 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 PLCXD2Q0VAA5 305 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 TMEM211Q6ICI0 200 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 TRIM46Q7Z4K8 759 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 TRABD2AQ86V40 505 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 BANPQ8N9N5 519 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 OMA1Q96E52 524 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 LCORQ96JN0 433 aaPredicted RBP18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 GATA5Q9BWX5 397 aaPredicted RBP18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 ANGPTL4Q9BY76 406 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 IQCGQ9H095 443 aaKnown RBP18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 SLC35C2Q9NQQ7 365 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 GIMAP4Q9NUV9 329 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 COQ3Q9NZJ6 369 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 EHD3Q9NZN3 535 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 B4GALT7Q9UBV7 327 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 PRODH2Q9UF12 536 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 ACAD8Q9UKU7 415 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 RSL1D1O76021 490 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 UROSP10746 265 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 COX6B1P14854 86 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 DDCP20711 480 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 ACVR2AP27037 513 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 GDF1P27539 372 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 CASP3P42574 277 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 GSTM5P46439 218 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 TRPC1P48995 793 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 IFFO1Q0D2I5 559 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 C2orf80Q0P641 193 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 PMPCAQ10713 525 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 FNDC7Q5VTL7 733 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 TMEM198Q66K66 360 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 TICAM1Q8IUC6 712 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 MCEMP1Q8IX19 187 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 SRRM1Q8IYB3 904 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 SAMD14Q8IZD0 417 aaPredicted RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 FAM9CQ8IZT9 166 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 RIBC1Q8N443 379 aaPredicted RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 CA5BP1Q8WTZ4 195 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 HGDQ93099 445 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 SECISBP2Q96T21 854 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 MYNNQ9NPC7 610 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 RRAGDQ9NQL2 400 aaPredicted RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 QPCTLQ9NXS2 382 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 SLC17A7Q9P2U7 560 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 LGALS13Q9UHV8 139 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 RNF6Q9Y252 685 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 FIS1Q9Y3D6 152 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 CCL27Q9Y4X3 112 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 FAM215AQ9Y5M1 114 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 PKDREJQ9NTG1 2253 aa18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 PHF3Q92576 2039 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-203ENST00000564272 FRG2CA6NGY1 282 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 FIGNL2A6NMB9 653 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 SPAG7O75391 227 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 KIR3DL1P43629 444 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 MASP1P48740 699 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 RPP38P78345 283 aaKnown RBP18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 CEBPEQ15744 281 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 RTL6Q6ICC9 239 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 FAM71E1Q6IPT2 247 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 CCDC71Q8IV32 467 aaPredicted RBP18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 OR7G2Q8NG99 324 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 NEIL3Q8TAT5 605 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 RND1Q92730 232 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 SARAFQ96BY9 339 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 HSPBAP1Q96EW2 488 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 FAM111AQ96PZ2 611 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 NODALQ96S42 347 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 MECRQ9BV79 373 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 METTL7AQ9H8H3 244 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 ACKR4Q9NPB9 350 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 SENP1Q9P0U3 644 aa18.29■□□□□ 0.52
SHCBP1-203ENST00000564272 FREM3P0C091 2139 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 AZIN1O14977 448 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 ACOX3O15254 700 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 TRIM13O60858 407 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 UGT2B11O75310 529 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 SNX4O95219 450 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 SLU7O95391 586 aaKnown RBP18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 NAGAP17050 411 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 DRD5P21918 477 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 ALDH3A1P30838 453 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 PPICP45877 212 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 CORO7P57737 925 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 DCAF7P61962 342 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 ERCC6LQ2NKX8 1250 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 WLSQ5T9L3 541 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 NOXRED1Q6NXP6 359 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 EMBQ6PCB8 327 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 PACS2Q86VP3 889 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 LIX1Q8N485 282 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 TMBIM1Q969X1 311 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 ERP27Q96DN0 273 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 GNRHR2Q96P88 292 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 BBS4Q96RK4 519 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms