RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SLC11A1P49279 550 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SUOXP51687 545 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 XKR4Q5GH76 650 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 C22orf39Q6P5X5 142 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 HAGHLQ6PII5 290 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 CRTC1Q6UUV9 634 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 KRT77Q7Z794 578 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ZNF566Q969W8 418 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ECHDC3Q96DC8 303 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SLC39A13Q96H72 371 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 PDLIM5Q96HC4 596 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 NDRG2Q9UN36 371 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ARAP2Q8WZ64 1704 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 MBLAC1A4D2B0 266 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 OR6C74A6NCV1 312 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 DISC1C4P0D8 188 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ZNF623O75123 536 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 CSO75390 466 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 GATBO75879 557 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ZNF3P17036 446 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 POU6F2P78424 691 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 HOXC5Q00444 222 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 TAF13Q15543 124 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 GLCCI1Q86VQ1 547 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SPRYD4Q8WW59 207 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ACOT12Q8WYK0 555 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 KCNN1Q92952 543 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 MAP6Q96JE9 813 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ZSWIM3Q96MP5 696 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 TSNAXQ99598 290 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SMG9Q9H0W8 520 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 TEX10Q9NXF1 929 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 STOX2Q9P2F5 926 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ASCC3Q8N3C0 2202 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SCN9AQ15858 1988 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 A0A1B0GVT2 93 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 C5orf51A6NDU8 294 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 DRGXA6NNA5 263 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 B4DXG7 233 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 PRODHO43272 600 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 RCBTB2O95199 551 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 PCCBP05166 539 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 IGFBP1P08833 259 aaPredicted RBP11.97□□□□□ -0.49
COMMD4-209ENST00000564068 INHBBP09529 407 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 GNSP15586 552 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SELPP16109 830 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 AOAHP28039 575 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 PSPHP78330 225 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 PRAMEF17Q5VTA0 474 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SLX4IPQ5VYV7 408 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 FAM198BQ6UWH4 519 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SERPINA12Q8IW75 414 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 IQCF2Q8IXL9 164 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 OR5D16Q8NGK9 328 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 MOSPD2Q8NHP6 518 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 NEIL2Q969S2 332 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 NIPAL2Q9H841 368 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 RDH14Q9HBH5 336 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 WDR45Q9Y484 360 aa11.97□□□□□ -0.49
COMMD4-209ENST00000564068 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 UPK1AO00322 258 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 PDCD5O14737 125 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 SOCS5O75159 536 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 WASP42768 502 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 KCNC3Q14003 757 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 CREB3L2Q70SY1 520 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 ZNF627Q7L945 461 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 OR51L1Q8NGJ5 315 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 TRPV4Q9HBA0 871 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 PCDHGA2Q9Y5H1 932 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 M0R082 166 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 CREBL2O60519 120 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-209ENST00000564068 SCN2BO60939 215 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 RGS9O75916 674 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-209ENST00000564068 HRGP04196 525 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 PCMT1P22061 227 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 VAMP1P23763 118 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 SKP1P63208 163 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 JAZF1Q86VZ6 243 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 CYB561A3Q8NBI2 242 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 MNTQ99583 582 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 METTL17Q9H7H0 456 aaPredicted RBP11.96□□□□□ -0.49
COMMD4-209ENST00000564068 NLGN3Q9NZ94 848 aa11.96□□□□□ -0.49
COMMD4-209ENST00000564068 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.96□□□□□ -0.5
COMMD4-209ENST00000564068 CACNG3O60359 315 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 ARHGEF15O94989 841 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 SPDEFO95238 335 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 RAB3BP20337 219 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 BMP8BP34820 402 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 ADH7P40394 386 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 CLCNKAP51800 687 aa11.96□□□□□ -0.5
COMMD4-209ENST00000564068 PON3Q15166 354 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms