RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MAP4K2Q12851 820 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 HLA-BQ31612 363 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 GPAT3Q53EU6 434 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 TCTN3Q6NUS6 607 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 TTC33Q6PID6 262 aaPredicted RBP12.07□□□□□ -0.48
SNX1-211ENST00000560829 FAM181AQ8N9Y4 354 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 SIMC1Q8NDZ2 872 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 HOXB13Q92826 284 aaPredicted RBP12.07□□□□□ -0.48
SNX1-211ENST00000560829 CCDC74AQ96AQ1 378 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 MVB12AQ96EY5 273 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 NECAB3Q96P71 396 aaPredicted RBP12.07□□□□□ -0.48
SNX1-211ENST00000560829 PINK1Q9BXM7 581 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 PIGUQ9H490 435 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 DUSP22Q9NRW4 184 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 TMEM9Q9P0T7 183 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 HCN3Q9P1Z3 774 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 ACAD8Q9UKU7 415 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 GON4LQ3T8J9 2241 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 KNL1Q8NG31 2342 aa12.07□□□□□ -0.48
SNX1-211ENST00000560829 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 MYOCOSA0A1B0GUC4 107 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 LOC100130705A0A1B0GUX0 176 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 MITFO75030 526 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 SEMA7AO75326 666 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 LGI1O95970 557 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 TFAP2AP05549 437 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ACP2P11117 423 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ANXA8P13928 327 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 NELFEP18615 380 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 CDH2P19022 906 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 CDH12P55289 794 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 COL9A2Q14055 689 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 KEAP1Q14145 624 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 NR0B2Q15466 257 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 MICAQ29983 383 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ARHGAP11BQ3KRB8 267 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 AMZ1Q400G9 498 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 C16orf62Q7Z3J2 963 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 THAP5Q7Z6K1 395 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 RABEPKQ7Z6M1 372 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 GATAD2AQ86YP4 633 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 C8orf59Q8N0T1 100 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 Q8N9G6 341 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 CDRT4Q8N9R6 151 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CHDHQ8NE62 594 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 GIPC3Q8TF64 312 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 MMABQ96EY8 250 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 PEX11GQ96HA9 241 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 STACQ99469 402 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 GRIP2Q9C0E4 1043 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ZNF768Q9H5H4 540 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 CAPN10Q9HC96 672 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 IRAK4Q9NWZ3 460 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 SATB2Q9UPW6 733 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 TMEM184BQ9Y519 407 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 CLDN16Q9Y5I7 305 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 U3KQA8 63 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 TDRD6O60522 2096 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 TRIM64CA6NLI5 447 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CLDN4O14493 209 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 FFAR1O14842 300 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ZNF749O43361 778 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 UGT2B11O75310 529 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 OR2B3O76000 313 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 SOX30O94993 753 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 GADD45GO95257 159 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ZIC2O95409 532 aaPredicted RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 EPPINO95925 133 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CLPTM1O96005 669 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CT62P0C5K7 136 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 MYF5P13349 255 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 RPL5P46777 297 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 YAP1P46937 504 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 ARL4DP49703 201 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 HSD17B7P56937 341 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 TUBA4AP68366 448 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 MAT1AQ00266 395 aaKnown RBP12.06□□□□□ -0.48
SNX1-211ENST00000560829 CHRNEQ04844 493 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 KCNAB1Q14722 419 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 DUSP5Q16690 384 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 EXOC3L2Q2M3D2 409 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ZNF691Q5VV52 312 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ISLR2Q6UXK2 745 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 OLIG3Q7RTU3 272 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 ZNF786Q8N393 782 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 TMEM105Q8N8V8 129 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 TSPAN14Q8NG11 270 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 OR10G2Q8NGC3 310 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 OR4D11Q8NGI4 311 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CEP76Q8TAP6 659 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 SLC9A6Q92581 669 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CDS1Q92903 461 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 GABARAPL3Q9BY60 117 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CXorf21Q9HAI6 301 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 PRTFDC1Q9NRG1 225 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 KRT84Q9NSB2 600 aa12.06□□□□□ -0.48
SNX1-211ENST00000560829 CUTCQ9NTM9 273 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms