RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TESCQ96BS2 214 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 TBC1D20Q96BZ9 403 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 COQ8BQ96D53 544 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 NAF1Q96HR8 494 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 NSL1Q96IY1 281 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ZNF681Q96N22 645 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PTCHD1Q96NR3 888 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 AMDHD1Q96NU7 426 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 YIPF4Q9BSR8 244 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SLC25A23Q9BV35 468 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 DDA1Q9BW61 102 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SCNM1Q9BWG6 230 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 NPLQ9BXD5 320 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 SPRY4Q9C004 299 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PAIP1Q9H074 479 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 SERHL2Q9H4I8 314 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PIF1Q9H611 641 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 ASCL3Q9NQ33 180 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 EQTNQ9NQ60 294 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SLC35C2Q9NQQ7 365 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PRTFDC1Q9NRG1 225 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PNO1Q9NRX1 252 aaKnown RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 CMTM6Q9NX76 183 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 VAPAQ9P0L0 249 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 AKAP7Q9P0M2 348 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 LEF1Q9UJU2 399 aaPredicted RBP4.87□□□□□ -1.63
SPG11-220ENST00000559933 ENTPD4Q9Y227 616 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 DTX4Q9Y2E6 619 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 NDUFAF1Q9Y375 327 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PCDHB14Q9Y5E9 798 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 PCDHGA7Q9Y5G6 932 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 SNX8Q9Y5X2 465 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 CROCCQ5TZA2 2017 aa4.87□□□□□ -1.63
SPG11-220ENST00000559933 IGKV3D-11A0A0A0MRZ8 115 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 TRBV5-3A0A0A0MS03 114 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 RNF103-CHMP3A0A140T963 221 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 C1orf226A1L170 272 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 CDRT15L2A8MXV6 281 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 MYO1GB0I1T2 1018 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 B2RBV5 119 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 IDSB3KWA1 339 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 RFXANKO14593 260 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 RGS13O14921 159 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 SLC22A2O15244 555 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 NVLO15381 856 aaKnown RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 RAD1O60671 282 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 UNC5CO95185 931 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 GPR75O95800 540 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 TSPAN15O95858 294 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 CLPSP04118 112 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 IFNA16P05015 189 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 IL6P05231 212 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 WT1P19544 449 aaPredicted RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 TCN1P20061 433 aaPredicted RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 NT5EP21589 574 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 PRDX6P30041 224 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 NTSP30990 170 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 STAT5AP42229 794 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 XKP51811 444 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 ARFIP1P53367 373 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 PRKAG1P54619 331 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 MANFP55145 182 aaKnown RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 CHRNEQ04844 493 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 MGAT2Q10469 447 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 STX4Q12846 297 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 ZNF267Q14586 743 aaPredicted RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 NCF4Q15080 339 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 MAPRE2Q15555 327 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 TRMT5Q32P41 509 aaKnown RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 ZNF628Q5EBL2 1059 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
SPG11-220ENST00000559933 C8orf82Q6P1X6 216 aaPredicted RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 PRMT9Q6P2P2 845 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 TNFAIP8L2Q6P589 184 aaPredicted RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 ANGPTL8Q6UXH0 198 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 OVCH1Q7RTY7 1134 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 ERMP1Q7Z2K6 904 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 R3HCC1LQ7Z5L2 792 aaKnown RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 ANKRD37Q7Z713 158 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 HMGN2P46Q86SG4 172 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 GALNT10Q86SR1 603 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 DEFB107AQ8IZN7 70 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 FAM9CQ8IZT9 166 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 GLB1L3Q8NCI6 653 aaPredicted RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 OR4K14Q8NGD5 310 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 OR52R1Q8NGF1 315 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 OR8J2Q8NGG1 315 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 OR5D16Q8NGK9 328 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 CMTM5Q96DZ9 223 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 FAM120BQ96EK7 910 aaKnown RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 MVB12AQ96EY5 273 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 C16orf58Q96GQ5 468 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 METTL2AQ96IZ6 378 aaKnown RBP4.86□□□□□ -1.63
SPG11-220ENST00000559933 CCDC115Q96NT0 180 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 SLC46A1Q96NT5 459 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 PANX1Q96RD7 426 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 BBS4Q96RK4 519 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 LMF1Q96S06 567 aa4.86□□□□□ -1.63
SPG11-220ENST00000559933 CGREF1Q99674 301 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms