RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KEAP1Q14145 624 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 TOMM20Q15388 145 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 PRICKLE4Q2TBC4 344 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 GGTA1PQ4G0N0 100 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 FBXW10Q5XX13 1052 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 FRG2Q64ET8 278 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 SLC30A6Q6NXT4 461 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 SLC48A1Q6P1K1 146 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 ZDHHC24Q6UX98 284 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 ANGPTL8Q6UXH0 198 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 PAGE2Q7Z2X7 111 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 MMP21Q8N119 569 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 OR52B6Q8NGF0 335 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 HGDQ93099 445 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 CDK15Q96Q40 435 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 FRG2BQ96QU4 278 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 OSBPL11Q9BXB4 747 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 MRPL1Q9BYD6 325 aaKnown RBP11.93□□□□□ -0.5
TPM1-220ENST00000559556 RAB17Q9H0T7 212 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 NOL11Q9H8H0 719 aaKnown RBP11.93□□□□□ -0.5
TPM1-220ENST00000559556 MAT2BQ9NZL9 334 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 ZNF639Q9UID6 485 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 PCTPQ9UKL6 214 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 CES1P1Q9UKY3 287 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 CFL2Q9Y281 166 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 STAB1Q9NY15 2570 aa11.93□□□□□ -0.5
TPM1-220ENST00000559556 A0A096LPK6 155 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 GOLGA6L10A6NI86 522 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 ACOX3O15254 700 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 ERN1O75460 977 aaKnown RBP11.92□□□□□ -0.5
TPM1-220ENST00000559556 KLK1P06870 262 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 CYP4B1P13584 511 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 NT5EP21589 574 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 HOXC12P31275 282 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 SERPINB8P50452 374 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 AGFG1P52594 562 aaKnown RBP11.92□□□□□ -0.5
TPM1-220ENST00000559556 DCAF7P61962 342 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 MGAT2Q10469 447 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 MAP4K2Q12851 820 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 NNATQ16517 81 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 NUP54Q7Z3B4 507 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 YRDCQ86U90 279 aaKnown RBP11.92□□□□□ -0.5
TPM1-220ENST00000559556 BIVMQ86UB2 503 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 KRTAP1-3Q8IUG1 177 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 METTL4Q8N3J2 472 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 WFDC11Q8NEX6 87 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 LINC01560Q8TB33 94 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 TRPC4APQ8TEL6 797 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 OMA1Q96E52 524 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 LCORQ96JN0 433 aaPredicted RBP11.92□□□□□ -0.5
TPM1-220ENST00000559556 UCN2Q96RP3 112 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 NODALQ96S42 347 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 TUBA1CQ9BQE3 449 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 SFXN3Q9BWM7 321 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 ITPAQ9BY32 194 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 OR2B2Q9GZK3 357 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 ZBTB26Q9HCK0 441 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 GALNT9Q9HCQ5 603 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 CLCF1Q9UBD9 225 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 EXO1Q9UQ84 846 aaKnown RBP11.92□□□□□ -0.5
TPM1-220ENST00000559556 PCDHA9Q9Y5H5 950 aa11.92□□□□□ -0.5
TPM1-220ENST00000559556 C1orf226A1L170 272 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 STX16O14662 325 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 ICOSLGO75144 302 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 RCBTB2O95199 551 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 CBX7O95931 251 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 HRGP04196 525 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 DRD2P14416 443 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 TYK2P29597 1187 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 GCKP35557 465 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 ARL1P40616 181 aaPredicted RBP11.91□□□□□ -0.5
TPM1-220ENST00000559556 MAPK12P53778 367 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 FOXF2Q12947 444 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 EXOSC7Q15024 291 aaKnown RBP11.91□□□□□ -0.5
TPM1-220ENST00000559556 TRADDQ15628 312 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 CCNYL2Q5T2Q4 361 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 DESI1Q6ICB0 168 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 FAM111BQ6SJ93 734 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 COMMD6Q7Z4G1 85 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 PLD6Q8N2A8 252 aaKnown RBP11.91□□□□□ -0.5
TPM1-220ENST00000559556 PTGR2Q8N8N7 351 aaPredicted RBP11.91□□□□□ -0.5
TPM1-220ENST00000559556 SMPDL3BQ92485 455 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 CTHRC1Q96CG8 243 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 DACH2Q96NX9 599 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 TM9SF2Q99805 663 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 YIPF4Q9BSR8 244 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 G6PC3Q9BUM1 346 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 RBM24Q9BX46 236 aaKnown RBP11.91□□□□□ -0.5
TPM1-220ENST00000559556 BRINP2Q9C0B6 783 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 AHSPQ9NZD4 102 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 KLRF1Q9NZS2 232 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 TMCO1Q9UM00 188 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 MAPRE3Q9UPY8 281 aa11.91□□□□□ -0.5
TPM1-220ENST00000559556 A0A1W2PPR1 153 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 SH3D21A4FU49 640 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 PRAMEF25A6NGN4 478 aa11.9□□□□□ -0.5
TPM1-220ENST00000559556 H0Y3Z8 333 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms