RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 NODALQ96S42 347 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 G6PC3Q9BUM1 346 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 CD244Q9BZW8 370 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 KLHL4Q9C0H6 718 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 NXF5Q9H1B4 397 aaKnown RBP16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 YAE1D1Q9NRH1 226 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 NSMCE4AQ9NXX6 385 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 DKKL1Q9UK85 242 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 ABCA1O95477 2261 aa16.13■□□□□ 0.17
TSPAN3-204ENST00000558394 A0A1W2PR48 441 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 PRAMEF25A6NGN4 478 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 HCRTR2O43614 444 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 FAM58BPP0C7Q3 252 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 CCDC166P0CW27 439 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 ZNF708P17019 499 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 EPORP19235 508 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 PTX3P26022 381 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 SRD5A2P31213 254 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 PIK3CBP42338 1070 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 ARFIP1P53367 373 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 GFRA1P56159 465 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 ATP6V0D1P61421 351 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 POU4F1Q01851 419 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 PLCXD2Q0VAA5 305 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 ILF2Q12905 390 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 FGFBP1Q14512 234 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 CHRFAM7AQ494W8 412 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 ZNF704Q6ZNC4 412 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 HIPK1Q86Z02 1210 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 RNF175Q8N4F7 328 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 LRRC39Q96DD0 335 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 OMA1Q96E52 524 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 TSPAN17Q96FV3 270 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 PBKQ96KB5 322 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 MTERF1Q99551 399 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 RHOJQ9H4E5 214 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 PLAC1Q9HBJ0 212 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 OPTCQ9UBM4 332 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 ASB4Q9Y574 426 aa16.12■□□□□ 0.17
TSPAN3-204ENST00000558394 HAX1O00165 279 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 ABCB7O75027 752 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 AIFM1O95831 613 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 CT62P0C5K7 136 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 GPX3P22352 226 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 CNTFP26441 200 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 CCKARP32238 428 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 CLDN18P56856 261 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 E2F2Q14209 437 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 ETFDHQ16134 617 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 STEAP4Q687X5 459 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 ANKRD34AQ69YU3 496 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 GRHL2Q6ISB3 625 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 PLCZ1Q86YW0 608 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 OR4K14Q8NGD5 310 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 HGDQ93099 445 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 REPS1Q96D71 796 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 TMCO6Q96DC7 493 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 TRMT61AQ96FX7 289 aaKnown RBP16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 MARK4Q96L34 752 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 BCAP29Q9UHQ4 241 aa16.11■□□□□ 0.17
TSPAN3-204ENST00000558394 A0A0A6YYD5 115 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 ACOX3O15254 700 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 TMPRSS11DO60235 418 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 EEDO75530 441 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 F12P00748 615 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 CD1DP15813 335 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 TBXA2RP21731 343 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 TCEA1P23193 301 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 EEFSECP57772 596 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 FRG1Q14331 258 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 CAPRIN1Q14444 709 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 OR4D1Q15615 310 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 DESI1Q6ICB0 168 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 MRM1Q6IN84 353 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 NUDT13Q86X67 352 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 UBQLNLQ8IYU4 475 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 WDSUB1Q8N9V3 476 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 LCORQ96JN0 433 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 REG4Q9BYZ8 158 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 PSD3Q9NYI0 1048 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 EHD3Q9NZN3 535 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 PROCRQ9UNN8 238 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 ANGPTL3Q9Y5C1 460 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 PCDHGA11Q9Y5H2 935 aa16.1■□□□□ 0.17
TSPAN3-204ENST00000558394 A0A087X1B8 175 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 K7EPI3 171 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 HS3ST1O14792 307 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 PHF1O43189 567 aaPredicted RBP16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 EMC8O43402 210 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 CD5LO43866 347 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 SOX30O94993 753 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 PPP3CBP16298 524 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 LOXP28300 417 aaPredicted RBP16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 IDUAP35475 653 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 GMPRP36959 345 aa16.09■□□□□ 0.17
TSPAN3-204ENST00000558394 PTGDSP41222 190 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms