RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 LILRB4Q8NHJ6 448 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 NEIL3Q8TAT5 605 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 CCDC126Q96EE4 140 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 LCORQ96JN0 433 aaPredicted RBP10.92□□□□□ -0.66
HERC1-202ENST00000558324 GNRHR2Q96P88 292 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 ANGPTL4Q9BY76 406 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 KCNJ16Q9NPI9 418 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
HERC1-202ENST00000558324 GIMAP4Q9NUV9 329 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 SENP1Q9P0U3 644 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 ZNF639Q9UID6 485 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 POLR3HQ9Y535 204 aaPredicted RBP10.92□□□□□ -0.66
HERC1-202ENST00000558324 ITPR2Q14571 2701 aa10.92□□□□□ -0.66
HERC1-202ENST00000558324 A0A0G2JNJ9 132 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 UGT2B11O75310 529 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 TOXO94900 526 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 SNX4O95219 450 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 DRD2P14416 443 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 CPA3P15088 417 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 KRT4P19013 534 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 ADH7P40394 386 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 CASP3P42574 277 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 EMDP50402 254 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 WNT3P56703 355 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 ZNF763Q0D2J5 394 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 HEPACAMQ14CZ8 416 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 CCDC153Q494R4 210 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 FNDC7Q5VTL7 733 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 FRMD7Q6ZUT3 714 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 SH2D5Q6ZV89 423 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 EIF1ADQ8N9N8 165 aaKnown RBP10.91□□□□□ -0.66
HERC1-202ENST00000558324 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 TMBIM1Q969X1 311 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 CTHRC1Q96CG8 243 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 LURAP1Q96LR2 239 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 NODALQ96S42 347 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 SECISBP2Q96T21 854 aaKnown RBP10.91□□□□□ -0.66
HERC1-202ENST00000558324 SPOCK3Q9BQ16 436 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 OSBPL11Q9BXB4 747 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 ENKD1Q9H0I2 346 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 GALNT9Q9HCQ5 603 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 TNFRSF12AQ9NP84 129 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 ACKR4Q9NPB9 350 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
HERC1-202ENST00000558324 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 KLRF1Q9NZS2 232 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 PRODH2Q9UF12 536 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 Q9UFV3 132 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 GRID1Q9ULK0 1009 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 MAPRE3Q9UPY8 281 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 C15orf41Q9Y2V0 281 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 SLC6A5Q9Y345 797 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 FIS1Q9Y3D6 152 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 PTGDR2Q9Y5Y4 395 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 CSMD1Q96PZ7 3565 aa10.91□□□□□ -0.66
HERC1-202ENST00000558324 ZNF407Q9C0G0 2248 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 NCKAP5O14513 1909 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 FBN2P35556 2912 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 FRG2CA6NGY1 282 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 ACOX3O15254 700 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 REM1O75628 298 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 JUNP05412 331 aaKnown RBP10.9□□□□□ -0.66
HERC1-202ENST00000558324 GABRA1P14867 456 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 SSTR2P30874 369 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 CRHR1P34998 444 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 PPICP45877 212 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 ZFP36L2P47974 494 aaKnown RBP10.9□□□□□ -0.66
HERC1-202ENST00000558324 CDK9P50750 372 aaKnown RBP10.9□□□□□ -0.66
HERC1-202ENST00000558324 CORO7P57737 925 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 KRTAP10-9P60411 292 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 TLE4Q04727 773 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 TFF3Q07654 80 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 C2orf80Q0P641 193 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 ZNF155Q12901 538 aaPredicted RBP10.9□□□□□ -0.66
HERC1-202ENST00000558324 ERCC6LQ2NKX8 1250 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 EIPR1Q53HC9 387 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 WIPI1Q5MNZ9 446 aaPredicted RBP10.9□□□□□ -0.66
HERC1-202ENST00000558324 CLEC6AQ6EIG7 209 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 GALNT18Q6P9A2 607 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 WDR53Q7Z5U6 358 aaPredicted RBP10.9□□□□□ -0.66
HERC1-202ENST00000558324 TDRPQ86YL5 185 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 ULK2Q8IYT8 1036 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 FAM9CQ8IZT9 166 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 CNPY4Q8N129 248 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 OR1J4Q8NGS1 313 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 RDH11Q8TC12 318 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 ZNF675Q8TD23 568 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 HGDQ93099 445 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 HSPBAP1Q96EW2 488 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 TMEM41AQ96HV5 264 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 BBS4Q96RK4 519 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 L2HGDHQ9H9P8 463 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 PPCSQ9HAB8 311 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 MIEF1Q9NQG6 463 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 SLC35C2Q9NQQ7 365 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 OXSMQ9NWU1 459 aa10.9□□□□□ -0.66
HERC1-202ENST00000558324 PCNX1Q96RV3 2341 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms