RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ACANP16112 2415 aa14.52□□□□□ -0.08
SCFD1-224ENST00000557713 C2orf72A6NCS6 295 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 GOSR1O95249 250 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 RHOXF2BP0C7M4 288 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 TMIGD3P0DMS9 266 aaPredicted RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 FEN1P39748 380 aaKnown RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 ARL1P40616 181 aaPredicted RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 MAPK12P53778 367 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 FOXF2Q12947 444 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 SNTA1Q13424 505 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 RCAN2Q14206 197 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 EXOSC7Q15024 291 aaKnown RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 NNATQ16517 81 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 GGTA1PQ4G0N0 100 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 TTC19Q6DKK2 380 aaPredicted RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 ADGRE4PQ86SQ3 457 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 WDSUB1Q8N9V3 476 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 TM4SF18Q96CE8 201 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 CTHRC1Q96CG8 243 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 OMA1Q96E52 524 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 LCORQ96JN0 433 aaPredicted RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 NSUN5Q96P11 429 aaKnown RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 UCN2Q96RP3 112 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 TUBA1CQ9BQE3 449 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 ITPAQ9BY32 194 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 BRINP2Q9C0B6 783 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 VPS11Q9H270 941 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 ZDHHC18Q9NUE0 388 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 BCAP29Q9UHQ4 241 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 EXO1Q9UQ84 846 aaKnown RBP14.52□□□□□ -0.09
SCFD1-224ENST00000557713 EXPH5Q8NEV8 1989 aa14.52□□□□□ -0.09
SCFD1-224ENST00000557713 A0A1B0GTL3 188 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 EEF1E1-BLOC1S5C9J1V9 151 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 STX16-NPEPL1H3BU86 382 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 STX16O14662 325 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 ACOX3O15254 700 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 EEF1E1O43324 174 aaKnown RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 UGT2B11O75310 529 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 GUCY1B2O75343 617 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 CBR3O75828 277 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 RCBTB2O95199 551 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 CBX7O95931 251 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 RBP1P09455 135 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 CYP4B1P13584 511 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 CSNK2A2P19784 350 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 DRD5P21918 477 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 DEKP35659 375 aaKnown RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 PPICP45877 212 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 DUSP2Q05923 314 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 GALNT1Q10472 559 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 IFT88Q13099 833 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 KEAP1Q14145 624 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 UAP1Q16222 522 aaPredicted RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 TRMT12Q53H54 448 aaKnown RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 FBXW10Q5XX13 1052 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 COMMD6Q7Z4G1 85 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 MILR1Q7Z6M3 343 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 MMP21Q8N119 569 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 OR4F6Q8NGB9 312 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 OSBPL11Q9BXB4 747 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 OR2B2Q9GZK3 357 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 GALNT9Q9HCQ5 603 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 SERHLQ9NQF3 203 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 FARSBQ9NSD9 589 aaKnown RBP14.51□□□□□ -0.09
SCFD1-224ENST00000557713 TMCO1Q9UM00 188 aa14.51□□□□□ -0.09
SCFD1-224ENST00000557713 GOLGA6L10A6NI86 522 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 CLCA1A8K7I4 914 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 TO15178 435 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ERAL1O75616 437 aaKnown RBP14.5□□□□□ -0.09
SCFD1-224ENST00000557713 HRGP04196 525 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 HOXC12P31275 282 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 GCKP35557 465 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 MAGEA12P43365 314 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 EMDP50402 254 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 GFRA1P56159 465 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 DCAF7P61962 342 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 PLCXD2Q0VAA5 305 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 SGO1Q5FBB7 561 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 UBAP2Q5T6F2 1119 aaKnown RBP14.5□□□□□ -0.09
SCFD1-224ENST00000557713 TRIM42Q8IWZ5 723 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 WFDC11Q8NEX6 87 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ADCY4Q8NFM4 1077 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 SLC44A1Q8WWI5 657 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ISL2Q96A47 359 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF681Q96N22 645 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ZFP3Q96NJ6 502 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 DACH2Q96NX9 599 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 TM9SF2Q99805 663 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 YIPF4Q9BSR8 244 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 G6PC3Q9BUM1 346 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 SFXN3Q9BWM7 321 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 RBM24Q9BX46 236 aaKnown RBP14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ELOVL6Q9H5J4 265 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ACSS3Q9H6R3 686 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 SLC12A4Q9UP95 1085 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 MAPRE3Q9UPY8 281 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 PLLPQ9Y342 182 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 ABCA4P78363 2273 aa14.5□□□□□ -0.09
SCFD1-224ENST00000557713 A0A1W2PPR1 153 aa14.49□□□□□ -0.09
SCFD1-224ENST00000557713 ESYT3A0FGR9 886 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms