RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DGCR14Q96DF8 476 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 ACTRT3Q9BYD9 372 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 RASSF1Q9NS23 344 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 IGHV5-51A0A0C4DH38 117 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 RHPN2P1A8MT19 583 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 PTGES3LE9PB15 166 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 FMO3P31513 532 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 HLCSP50747 726 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 AFF3P51826 1226 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 CDK5R2Q13319 367 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 NEDD8Q15843 81 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 KCTD8Q6ZWB6 473 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 C16orf62Q7Z3J2 963 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 DNAJC22Q8N4W6 341 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 CDS1Q92903 461 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 ALPK1Q96QP1 1244 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 NMNAT1Q9HAN9 279 aaPredicted RBP17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 ADAP2Q9NPF8 381 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 RNF215Q9Y6U7 377 aa17.16■□□□□ 0.34
SDR39U1-220ENST00000556548 TRBV4-1A0A0J9YWV2 114 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 OR2W5A6NFC9 320 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 CHST10O43529 356 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 XPNPEP2O43895 674 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 FCMRO60667 390 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 EPPINO95925 133 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 HNRNPCP07910 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 MAT1AQ00266 395 aaKnown RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 PIN1Q13526 163 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 C14orf28Q4W4Y0 310 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 ZNF554Q86TJ5 538 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 BBS10Q8TAM1 723 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 HDAC2Q92769 488 aaKnown RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 PRR14Q9BWN1 585 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 NPLQ9BXD5 320 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 YTHDF1Q9BYJ9 559 aaKnown RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 RBM38Q9H0Z9 239 aaKnown RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 POLR1BQ9H9Y6 1135 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 TUBA8Q9NY65 449 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 NDUFA13Q9P0J0 144 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 LRIT1Q9P2V4 623 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 CCNB2O95067 398 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 MLLT3P42568 568 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 PDX1P52945 283 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 OR1D5P58170 312 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 ERV3-1Q14264 604 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 KCNAB1Q14722 419 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 SYT16Q17RD7 645 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 AMZ1Q400G9 498 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 VRK2Q86Y07 508 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 CCDC71Q8IV32 467 aaPredicted RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 DNASE2BQ8WZ79 361 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 TCTN2Q96GX1 697 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 MPP4Q96JB8 637 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 SLC38A1Q9H2H9 487 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 EPB41L1Q9H4G0 881 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 CAPN10Q9HC96 672 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 MKLN1Q9UL63 735 aa17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 NDRG4Q9ULP0 352 aaKnown RBP17.15■□□□□ 0.34
SDR39U1-220ENST00000556548 CEP192Q8TEP8 1941 aa17.14■□□□□ 0.34
SDR39U1-220ENST00000556548 LILRA5A6NI73 299 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 FRS3O43559 492 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 GPR75O95800 540 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 RYKP34925 604 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 LIMS1P48059 325 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 PMS2P3Q13401 168 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 EXOSC7Q15024 291 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 SMN1Q16637 294 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 RBM48Q5RL73 367 aaKnown RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 ATAD3BQ5T9A4 648 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 MLIPQ5VWP3 458 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 LAIR1Q6GTX8 287 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 C17orf82Q86X59 251 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 UBALD2Q8IYN6 164 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 SAMD14Q8IZD0 417 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 ARHGEF39Q8N4T4 335 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 Q8N9G6 341 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 AQP11Q8NBQ7 271 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 RASSF5Q8WWW0 418 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 SLC35B4Q969S0 331 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 MS4A4EQ96PG1 132 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 BCL2L10Q9HD36 194 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 CEPT1Q9Y6K0 416 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 CACNA1IQ9P0X4 2223 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 A0A0G2JPF8 293 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 TRIM64CA6NLI5 447 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 HNRNPCL2B2RXH8 293 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 HNRNPCL3B7ZW38 293 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 ZIC2O95409 532 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 GASTP01350 101 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 CT62P0C5K7 136 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 HNRNPCL4P0DMR1 293 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 FNTBP49356 437 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 SEPHS1P49903 392 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 KEAP1Q14145 624 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 GNA13Q14344 377 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 ZNF628Q5EBL2 1059 aa17.14■□□□□ 0.33
SDR39U1-220ENST00000556548 COLEC12Q5KU26 742 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms