RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SLC2A7Q6PXP3 512 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 DLEU7Q6UYE1 221 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 MSANTD1Q6ZTZ1 278 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 VN1R5Q7Z5H4 357 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 SRFBP1Q8NEF9 429 aaKnown RBP11.59□□□□□ -0.55
SHMT2-214ENST00000554604 OR8J3Q8NGG0 315 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 WDR20Q8TBZ3 569 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 ADAMTS18Q8TE60 1221 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
SHMT2-214ENST00000554604 KCNC2Q96PR1 638 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 F2RL3Q96RI0 385 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 SERINC2Q96SA4 455 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 UTP23Q9BRU9 249 aaKnown RBP11.59□□□□□ -0.55
SHMT2-214ENST00000554604 NANOGQ9H9S0 305 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 BRF2Q9HAW0 419 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 BATF3Q9NR55 127 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 AP3M1Q9Y2T2 418 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 MMACHCQ9Y4U1 282 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 AP4S1Q9Y587 144 aa11.59□□□□□ -0.55
SHMT2-214ENST00000554604 IGKV3D-11A0A0A0MRZ8 115 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 SAGE2PA6NJ88 616 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 SH3BGRLO75368 114 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 KCNH1O95259 989 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 RASAL1O95294 804 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 DDAH2O95865 285 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 CRYABP02511 175 aaKnown RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 GP1BBP13224 206 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ATP6V1B2P21281 511 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 CERS1P27544 350 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 SERPINB1P30740 379 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 DGKQP52824 942 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 HSD17B7P56937 341 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 RAB38P57729 211 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 OC90Q02509 493 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 LIPEQ05469 1076 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 DDX39BQ13838 428 aaKnown RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 PTGR1Q14914 329 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ZNF766Q5HY98 468 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ABHD17CQ6PCB6 329 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 RPS19BP1Q86WX3 136 aaKnown RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ZNF595Q8IYB9 648 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 HORMAD2Q8N7B1 307 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 FAM47BQ8NA70 645 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 TESCQ96BS2 214 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 C5orf34Q96MH7 638 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 QRFPRQ96P65 431 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 BTBD9Q96Q07 612 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 CGREF1Q99674 301 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 KCTD14Q9BQ13 255 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ROGDIQ9GZN7 287 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ALG2Q9H553 416 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 CDCP1Q9H5V8 836 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 NECTIN3Q9NQS3 549 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 PRTFDC1Q9NRG1 225 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 PNO1Q9NRX1 252 aaKnown RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ARMC1Q9NVT9 282 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 ANKRD10Q9NXR5 420 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 CNOT11Q9UKZ1 510 aaKnown RBP11.58□□□□□ -0.56
SHMT2-214ENST00000554604 SLC5A6Q9Y289 635 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 DTNAQ9Y4J8 743 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 PCDHGA11Q9Y5H2 935 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 SNX13Q9Y5W8 968 aa11.58□□□□□ -0.56
SHMT2-214ENST00000554604 GABRR3A8MPY1 467 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 MYO1DO94832 1006 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TBX6O95947 436 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TGFB1P01137 390 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 PGRP06401 933 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 CD46P15529 392 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 SDC1P18827 310 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 CD96P40200 585 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 ST13P50502 369 aaKnown RBP11.57□□□□□ -0.56
SHMT2-214ENST00000554604 NEK2P51955 445 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 LIM2P55344 173 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 C21orf58P58505 322 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TUBA3CQ13748 450 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 OR1C1Q15619 314 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 MAPKAPK3Q16644 382 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 FAM174BQ3ZCQ3 159 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TMEM35AQ53FP2 167 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 RABL3Q5HYI8 236 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TUBA3EQ6PEY2 450 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 LAS2Q8IYD9 372 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 LGI4Q8N135 537 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 LILRA2Q8N149 483 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 OR7G3Q8NG95 312 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 ELP5Q8TE02 316 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 NR4A3Q92570 626 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 GTF2H4Q92759 462 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 SLCO4A1Q96BD0 722 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 REPS1Q96D71 796 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 APIPQ96GX9 242 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 NR1H4Q96RI1 486 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TAAR6Q96RI8 345 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 PKP2Q99959 881 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 SLX1AQ9BQ83 275 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 CENPKQ9BS16 269 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 TBCDQ9BTW9 1192 aa11.57□□□□□ -0.56
SHMT2-214ENST00000554604 MS4A8Q9BY19 250 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms