RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RPA4Q13156 261 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 CBX3Q13185 183 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 CEACAM7Q14002 265 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 TYSND1Q2T9J0 566 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 HERC4Q5GLZ8 1057 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 GBP6Q6ZN66 633 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 LINC00696Q6ZRV3 163 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 NLRP14Q86W24 1093 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 NAXDQ8IW45 347 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 OR8H1Q8NGG4 311 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 DNASE1L2Q92874 299 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 TBC1D31Q96DN5 1066 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 CABS1Q96KC9 395 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 PARK7Q99497 189 aaKnown RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 CCM2Q9BSQ5 444 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 DEFB126Q9BYW3 111 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 ST6GALNAC4Q9H4F1 302 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 THAP9Q9H5L6 903 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 AKIRIN1Q9H9L7 192 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 MED17Q9NVC6 651 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 AKAP7Q9P0M2 348 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-210ENST00000553693 SENP1Q9P0U3 644 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 FBXL5Q9UKA1 691 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 GMEB2Q9UKD1 530 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 C4BP0C0L5 1744 aa2.79□□□□□ -1.96
SCFD1-210ENST00000553693 MEGF6O75095 1541 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 NSD3Q9BZ95 1437 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 CNTNAP1P78357 1384 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 UBR3Q6ZT12 1888 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 EVC2Q86UK5 1308 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 TAF1LQ8IZX4 1826 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 KIF13BQ9NQT8 1826 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 A4D1N5 150 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 P2RX6O15547 441 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 B4GAT1O43505 415 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 ZBTB14O43829 449 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 CLN5O75503 358 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 SIX3O95343 332 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-210ENST00000553693 PDGFBP01127 241 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-210ENST00000553693 OR9G9P0C7N8 305 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 FAM58BPP0C7Q3 252 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 PSMB4P28070 264 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 MEOX2P50222 304 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 GSTO1P78417 241 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 GPR50Q13585 617 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 MEP1BQ16820 701 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 IFI44LQ53G44 452 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 SLC10A5Q5PT55 438 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF776Q68DI1 518 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-210ENST00000553693 ALKBH5Q6P6C2 394 aaKnown RBP2.78□□□□□ -1.96
SCFD1-210ENST00000553693 CNSTQ6PJW8 725 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 GLRX5Q86SX6 157 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 PEX5LQ8IYB4 626 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 SAMD12Q8N8I0 201 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 RNF149Q8NC42 400 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 ZNRF1Q8ND25 227 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 OR7G3Q8NG95 312 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 FIBINQ8TAL6 211 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 CORO2AQ92828 525 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 ABCG8Q9H221 673 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 TMEM206Q9H813 350 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 LMAN1LQ9HAT1 526 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 TUFT1Q9NNX1 390 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 AMBNQ9NP70 447 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 RAB9BQ9NP90 201 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 MID1IP1Q9NPA3 183 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 CHCHD3Q9NX63 227 aaKnown RBP2.78□□□□□ -1.96
SCFD1-210ENST00000553693 VNN3Q9NY84 501 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 Q9UF83 564 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 STX8Q9UNK0 236 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 PKD1L3Q7Z443 1732 aa2.78□□□□□ -1.96
SCFD1-210ENST00000553693 TNRC6CQ9HCJ0 1690 aaKnown RBP2.78□□□□□ -1.96
SCFD1-210ENST00000553693 KDM6AO15550 1401 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 MAP3K19Q56UN5 1328 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 FAM208AQ9UK61 1670 aaKnown RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 C13orf42A0A1B0GVH6 325 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 OR5H15A6NDH6 313 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 CCDC69A6NI79 296 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ZNF724A8MTY0 619 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 TNFSF11O14788 317 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 MCF2LO15068 1137 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 HSF2BPO75031 334 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 B3GALNT1O75752 331 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 LYNP07948 512 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 C8orf89P0DMQ9 161 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 LBPP18428 481 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ADRA2CP18825 462 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ACKR3P25106 362 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 FASP25445 335 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 HMGB2P26583 209 aaKnown RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 FNTAP49354 379 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ASIC1P78348 528 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ACTN3Q08043 901 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ABRQ12979 859 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 ABRAXAS2Q15018 415 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 GSG1Q2KHT4 349 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 DMKNQ6E0U4 476 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-210ENST00000553693 CGB2Q6NT52 195 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 LPCAT1Q8NF37 534 aa2.77□□□□□ -1.97
SCFD1-210ENST00000553693 RIT1Q92963 219 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms