RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 OR10G3Q8NGC4 313 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 OR5M3Q8NGP4 307 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 CIDECQ96AQ7 238 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 LCORQ96JN0 433 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 ATP6V1G3Q96LB4 118 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 GPR137Q96N19 417 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 FAM173AQ9BQD7 235 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 VIPAS39Q9H9C1 493 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 THAP1Q9NVV9 213 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 SH3BP4Q9P0V3 963 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 OSGIN2Q9Y236 505 aa17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 CHCHD2Q9Y6H1 151 aaPredicted RBP17.25■□□□□ 0.35
PRPF40B-206ENST00000547764 CAPN14A8MX76 684 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 PDPK1O15530 556 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 ASNA1O43681 348 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 SNNO75324 88 aaPredicted RBP17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 PRPS2P11908 318 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 DRD5P21918 477 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 ABCD3P28288 659 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 PIGAP37287 484 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 MC3RP41968 323 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 PPICP45877 212 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 DNASE1L1P49184 302 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 FBXW4P57775 412 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 DCAF7P61962 342 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 PTGR1Q14914 329 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 ATG16L1Q676U5 607 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 TMEM107Q6UX40 140 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 ZNF551Q7Z340 670 aaPredicted RBP17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 RAB3IL1Q8TBN0 382 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 MTERF3Q96E29 417 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 HSPBAP1Q96EW2 488 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 SH3GL2Q99962 352 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 NUF2Q9BZD4 464 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 MANSC1Q9H8J5 431 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 AKTIPQ9H8T0 292 aa17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 GPR55Q9Y2T6 319 aaPredicted RBP17.24■□□□□ 0.35
PRPF40B-206ENST00000547764 A0A087WV62 115 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 PLOD2O00469 737 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 TFECO14948 347 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 ACOX3O15254 700 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 HS6ST1O60243 411 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 SLITRK5O94991 958 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 AGFG2O95081 481 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 TMED10P49755 219 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 EMX2Q04743 252 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 MAD2L1Q13257 205 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 RPS6KA2Q15349 733 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 PRAMEF20Q5VT98 475 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 GK5Q6ZS86 529 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 R3HCC1LQ7Z5L2 792 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 TRIM42Q8IWZ5 723 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 FBXW8Q8N3Y1 598 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 ELP4Q96EB1 424 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 VSTM2LQ96N03 204 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 FOLH1BQ9HBA9 442 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 TAS2R9Q9NYW1 312 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 CNIH4Q9P003 139 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 ATP6V1HQ9UI12 483 aa17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 CNOT11Q9UKZ1 510 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 C19orf53Q9UNZ5 99 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 EIF3LQ9Y262 564 aaKnown RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 USP9XQ93008 2570 aaPredicted RBP17.23■□□□□ 0.35
PRPF40B-206ENST00000547764 FRG2CA6NGY1 282 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 UPK1AO00322 258 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 TP53I11O14683 189 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 SCAMP2O15127 329 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 TO15178 435 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 ERN1O75460 977 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 ABCB1P08183 1280 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 G6PDP11413 515 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 NAGAP17050 411 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 HPCAL1P37235 193 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 FRKP42685 505 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 CORO7P57737 925 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 PPIAP62937 165 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 PLGLB1Q02325 96 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 FOXO1Q12778 655 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 HSPB3Q12988 150 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 SMU1Q2TAY7 513 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 OR2L13Q8N349 312 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 KRTCAP2Q8N6L1 136 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 OR7A2PQ8NGA2 310 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 OMA1Q96E52 524 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 ZBED6CLQ96FA7 236 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 MAGED4Q96JG8 741 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 BTBD9Q96Q07 612 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 TTTY12Q9BZ98 90 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 PROK2Q9HC23 129 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 DDX18Q9NVP1 670 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 ASIC5Q9NY37 505 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 TUBA8Q9NY65 449 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 NOP53Q9NZM5 478 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 ERRFI1Q9UJM3 462 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 LRRK2Q5S007 2527 aa17.22■□□□□ 0.35
PRPF40B-206ENST00000547764 FAM166BA8MTA8 275 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 COQ9O75208 318 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 PPM1BO75688 479 aa17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 GLSO94925 669 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-206ENST00000547764 STSP08842 583 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms