RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 CASKO14936 926 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 CDH16O75309 829 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 RHOXF2BP0C7M4 288 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 PIK3R1P27986 724 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 STARP49675 285 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 FAM27E3Q08E93 113 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 MGAT2Q10469 447 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 CPSF6Q16630 551 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP15-206ENST00000546718 SLC30A6Q6NXT4 461 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 PRSS57Q6UWY2 283 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
USP15-206ENST00000546718 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 OR7G1Q8NGA0 311 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 OR14L1PQ8NHC6 308 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 RDH11Q8TC12 318 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 PIGTQ969N2 578 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 OMA1Q96E52 524 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 PERPQ96FX8 193 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 WFIKKN1Q96NZ8 548 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 CCL19Q99731 98 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 ACBD3Q9H3P7 528 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 KLHL28Q9NXS3 571 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 NDRG3Q9UGV2 375 aa13.12□□□□□ -0.31
USP15-206ENST00000546718 EXO1Q9UQ84 846 aaKnown RBP13.12□□□□□ -0.31
USP15-206ENST00000546718 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 B4DXG7 233 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 PLOD2O00469 737 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 UGT2B11O75310 529 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 TGM6O95932 706 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 CPMP14384 443 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 ZNF708P17019 499 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 NAGAP17050 411 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 KRT15P19012 456 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 NT5EP21589 574 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 GCKP35557 465 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 PIK3CGP48736 1102 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 XKP51811 444 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 DIO3P55073 304 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 CLDN18P56856 261 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 PHEXP78562 749 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 SNTA1Q13424 505 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 EXOSC7Q15024 291 aaKnown RBP13.11□□□□□ -0.31
USP15-206ENST00000546718 PRICKLE4Q2TBC4 344 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 KBTBD12Q3ZCT8 623 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 ENPP6Q6UWR7 440 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 IFNEQ86WN2 208 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 CREG2Q8IUH2 290 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 CENPLQ8N0S6 344 aaPredicted RBP13.11□□□□□ -0.31
USP15-206ENST00000546718 OR4K14Q8NGD5 310 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 CDKL2Q92772 493 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 PIK3IP1Q96FE7 263 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 MARK4Q96L34 752 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 BDH2Q9BUT1 245 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
USP15-206ENST00000546718 UBTD1Q9HAC8 227 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 NMRAL1Q9HBL8 299 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 MAT2BQ9NZL9 334 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 KLRF1Q9NZS2 232 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 FBXL2Q9UKC9 423 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 SNX24Q9Y343 169 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 RNF11Q9Y3C5 154 aa13.11□□□□□ -0.31
USP15-206ENST00000546718 SONP18583 2426 aaKnown RBP13.1□□□□□ -0.31
USP15-206ENST00000546718 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 FOXE1O00358 373 aaPredicted RBP13.1□□□□□ -0.31
USP15-206ENST00000546718 MSTNO14793 375 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 HCRTR2O43614 444 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 UGDHO60701 494 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 CBR3O75828 277 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 SEMA3DO95025 777 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 LTA4HP09960 611 aaKnown RBP13.1□□□□□ -0.31
USP15-206ENST00000546718 TCP1P17987 556 aaKnown RBP13.1□□□□□ -0.31
USP15-206ENST00000546718 CRYGSP22914 178 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 LOXP28300 417 aaPredicted RBP13.1□□□□□ -0.31
USP15-206ENST00000546718 MC3RP41968 323 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 GPX6P59796 221 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 IRF9Q00978 393 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 DUSP2Q05923 314 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 PLCXD2Q0VAA5 305 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 GAB1Q13480 694 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 ACKR1Q16570 336 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 RAPH1Q70E73 1250 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 NUP54Q7Z3B4 507 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 GOLGA7Q7Z5G4 137 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 TBC1D1Q86TI0 1168 aaPredicted RBP13.1□□□□□ -0.31
USP15-206ENST00000546718 GRAMD2AQ8IUY3 354 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 L3MBTL4Q8NA19 623 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 LRRN4CLQ8ND94 238 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 KCTD4Q8WVF5 259 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 NXNL1Q96CM4 212 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 REPS1Q96D71 796 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 STARD4Q96DR4 205 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 SAYSD1Q9NPB0 183 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 PSD3Q9NYI0 1048 aa13.1□□□□□ -0.31
USP15-206ENST00000546718 TAS2R10Q9NYW0 307 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms