RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ACOT12Q8WYK0 555 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 OR5P2Q8WZ92 322 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 CASD1Q96PB1 797 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 SLC38A2Q96QD8 506 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 GPA33Q99795 319 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 PLA2G12AQ9BZM1 189 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 EGLN3Q9H6Z9 239 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 COQ3Q9NZJ6 369 aa13.41□□□□□ -0.26
SRP54-202ENST00000546080 GREM1O60565 184 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 ATG13O75143 517 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 GAAP10253 952 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 NPPBP16860 134 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 GSTM3P21266 225 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 TALDO1P37837 337 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 SLC6A11P48066 632 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 ACLYP53396 1101 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 POU4F3Q15319 338 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 IDNKQ5T6J7 187 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 PXDC1Q5TGL8 231 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 SLC27A4Q6P1M0 643 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 C1orf94Q6P1W5 598 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 Q6ZNB5 142 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 HDDC2Q7Z4H3 204 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 C6orf120Q7Z4R8 191 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 DNAJB7Q7Z6W7 309 aaPredicted RBP13.4□□□□□ -0.26
SRP54-202ENST00000546080 COMMD7Q86VX2 200 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 ZNF655Q8N720 491 aaPredicted RBP13.4□□□□□ -0.26
SRP54-202ENST00000546080 ZNF485Q8NCK3 441 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 OR11H7Q8NGC8 314 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 WDR34Q96EX3 536 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 MSANTD3Q96H12 275 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 THAP7Q9BT49 309 aaPredicted RBP13.4□□□□□ -0.26
SRP54-202ENST00000546080 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 SAP130Q9H0E3 1048 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 ABCG5Q9H222 651 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 PTTG3PQ9NZH4 202 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 CCDC88CQ9P219 2028 aa13.4□□□□□ -0.26
SRP54-202ENST00000546080 TRAV6A0A075B6T7 132 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 C7orf66A4D0T2 115 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 HMGN4O00479 90 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 PRRG1O14668 218 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 EFCAB14O75071 495 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 GALTP07902 379 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 MAPK9P45984 424 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CTSCP53634 463 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 LSM11P83369 360 aaKnown RBP eCLIP13.39□□□□□ -0.27
SRP54-202ENST00000546080 HSPB3Q12988 150 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 ENTPD8Q5MY95 495 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 KIF18BQ86Y91 864 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 ADGRF3Q8IZF5 1079 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 DBF4BQ8NFT6 615 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 BCL7CQ8WUZ0 217 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 SCMH1Q96GD3 660 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 C1QTNF7Q9BXJ2 289 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 SLAMF7Q9NQ25 335 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 ZNF624Q9P2J8 865 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 SLC5A10A0PJK1 596 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 KDM4EB2RXH2 506 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 LANCL1O43813 399 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 PDHA2P29803 388 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CDH11P55287 796 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 TAP2Q03519 686 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 IKZF1Q13422 519 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 RAET1GQ6H3X3 334 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 B3GLCTQ6Y288 498 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 HSD11B1LQ7Z5J1 315 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CDH24Q86UP0 819 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 LRRC28Q86X40 367 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 MEX3DQ86XN8 651 aaKnown RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 LMNTD1Q8N9Z9 388 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 OR5M3Q8NGP4 307 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 UBL7Q96S82 380 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 ZSCAN5AQ9BUG6 496 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CLEC4MQ9H2X3 399 aaPredicted RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 NEUROD4Q9HD90 331 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CTPS2Q9NRF8 586 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 ENAMQ9NRM1 1142 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 IMP3Q9NV31 184 aaKnown RBP13.39□□□□□ -0.27
SRP54-202ENST00000546080 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 SLC9A8Q9Y2E8 581 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 YIPF1Q9Y548 306 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CACNG2Q9Y698 323 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
SRP54-202ENST00000546080 CIB4A0PJX0 185 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 SEPT4O43236 478 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 UBXN7O94888 489 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 C1orf105O95561 183 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 IFNA7P01567 189 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF250P15622 560 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 DDCP20711 480 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ENPP1P22413 925 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 RPA4Q13156 261 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 SNTA1Q13424 505 aa13.38□□□□□ -0.27
SRP54-202ENST00000546080 ZNF267Q14586 743 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms