RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 RAG2P55895 527 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 NDUFA9Q16795 377 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 TFDP3Q5H9I0 405 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SPANXN2Q5MJ10 180 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 GJB7Q6PEY0 223 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 PRSS55Q6UWB4 352 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 TMEM102Q8N9M5 508 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ZFAND1Q8TCF1 268 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 NPLQ9BXD5 320 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 LHX9Q9NQ69 397 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 PXMP2Q9NR77 195 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 YAE1D1Q9NRH1 226 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ABCC13Q9NSE7 274 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 LRRC37AA6NMS7 1700 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 INSIG1O15503 277 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 PAPSS1O43252 624 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SPARCP09486 303 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ZP3P21754 424 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 HOXC8P31273 242 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 GRM5P41594 1212 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 MAMLD1Q13495 774 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SV2CQ496J9 727 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ABLIM2Q6H8Q1 611 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 UQCC3Q6UW78 93 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 PAQR7Q86WK9 346 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 TSTD1Q8NFU3 115 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SCARB1Q8WTV0 552 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SFXN2Q96NB2 322 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 MYOZ1Q9NP98 299 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ACP6Q9NPH0 428 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 LINC00862A6NCI5 91 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 GABRR3A8MPY1 467 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 YY2O15391 372 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SNNO75324 88 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 CD8BP10966 210 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 UCP1P25874 307 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 VIPR2P41587 438 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 PRKXP51817 358 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SUMO3P55854 103 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 RIPPLY3P57055 190 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 MVKQ03426 396 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 RBM48Q5RL73 367 aaKnown RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ATRAIDQ6UW56 229 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 FAM151BQ6UXP7 276 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 THSD4Q6ZMP0 1018 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ABHD12BQ7Z5M8 362 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 WDTC1Q8N5D0 677 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 TOP6BLQ8N6T0 577 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 DUSP19Q8WTR2 217 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF296Q8WUU4 475 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 SLC35C1Q96A29 364 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 KTI12Q96EK9 354 aaPredicted RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 UBQLN2Q9UHD9 624 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 HSF4Q9ULV5 492 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 FARSAQ9Y285 508 aaKnown RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 DDX60LQ5H9U9 1706 aaKnown RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 TRBV11-1A0A0K0K1C0 115 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 AQP7P3A6NL99 342 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 E9PAM4 449 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 FZD9O00144 591 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 COPEO14579 308 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 CDC40O60508 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 KRT33AO76009 404 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 PTPN3P26045 913 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 CRYBA4P53673 196 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 MRPS11P82912 194 aaKnown RBP8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ARHGEF7Q14155 803 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 MROH9Q5TGP6 573 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 RAET1LQ5VY80 246 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 LRRC66Q68CR7 880 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 REP15Q6BDI9 236 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 DEF8Q6ZN54 512 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ADGRA1Q86SQ6 560 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 RHOT1Q8IXI2 618 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 TMEM104Q8NE00 496 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 GGACTQ9BVM4 153 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 DDA1Q9BW61 102 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 WDR11Q9BZH6 1224 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 MSRB2Q9Y3D2 182 aa8.44□□□□□ -1.06
VPS13D-212ENST00000543766 PHOX2AO14813 284 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SPINT1O43278 529 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 TRIM13O60858 407 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PTTG1O95997 202 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SERPINA1P01009 418 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 PMP2P02689 132 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 NR3C1P04150 777 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
VPS13D-212ENST00000543766 ITGA3P26006 1051 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 EPHA8P29322 1005 aaPredicted RBP8.43□□□□□ -1.06
VPS13D-212ENST00000543766 SLC25A3Q00325 362 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 OR5I1Q13606 314 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 LRRC8EQ6NSJ5 796 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 UNQ6494/PRO21346Q6UXR6 183 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 TFAP2EQ6VUC0 442 aa8.43□□□□□ -1.06
VPS13D-212ENST00000543766 C1orf54Q8WWF1 131 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms