RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TGIF1Q15583 401 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 ZSCAN26Q16670 478 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 FILIP1LQ4L180 1135 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 SMG6Q86US8 1419 aaKnown RBP4.25□□□□□ -1.73
YBX3-210ENST00000540975 ZNF713Q8N859 430 aaPredicted RBP4.25□□□□□ -1.73
YBX3-210ENST00000540975 ARL10Q8N8L6 244 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 BIRC7Q96CA5 298 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 CFAP36Q96G28 342 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 GSDMAQ96QA5 445 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 PRAM1Q96QH2 718 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 FUNDC2Q9BWH2 189 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 OSBPL8Q9BZF1 889 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 TNMDQ9H2S6 317 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 AKIRIN1Q9H9L7 192 aaPredicted RBP4.25□□□□□ -1.73
YBX3-210ENST00000540975 TIGARQ9NQ88 270 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 ZMAT5Q9UDW3 170 aaKnown RBP4.25□□□□□ -1.73
YBX3-210ENST00000540975 PRODH2Q9UF12 536 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 PCSK1NQ9UHG2 260 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 EMCNQ9ULC0 261 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 PIK3R4Q99570 1358 aa4.25□□□□□ -1.73
YBX3-210ENST00000540975 SOGA1O94964 1423 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 IGHV3-35A0A0C4DH35 117 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 CDX4O14627 284 aaPredicted RBP4.24□□□□□ -1.73
YBX3-210ENST00000540975 CPLX1O14810 134 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 GPAA1O43292 621 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 E2F6O75461 281 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 TGDSO95455 350 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 ERVPABLB-1P60509 514 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 RPS4XP62701 263 aaKnown RBP4.24□□□□□ -1.73
YBX3-210ENST00000540975 HERV-K104P63124 156 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 KLF5Q13887 457 aaPredicted RBP4.24□□□□□ -1.73
YBX3-210ENST00000540975 RFTN1Q14699 578 aaPredicted RBP4.24□□□□□ -1.73
YBX3-210ENST00000540975 HAGHQ16775 308 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 GLRA4Q5JXX5 417 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 MFSD7Q6UXD7 560 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 UNC5DQ6UXZ4 953 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 LUZP1Q86V48 1076 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 MYOCDQ8IZQ8 938 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 TEX9Q8N6V9 391 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 NUS1Q96E22 293 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 JPH2Q9BR39 696 aaPredicted RBP4.24□□□□□ -1.73
YBX3-210ENST00000540975 TRPV5Q9NQA5 729 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 CLIP2Q9UDT6 1046 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 SNX5Q9Y5X3 404 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 ERICH3Q5RHP9 1530 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 NCOA2Q15596 1464 aa4.24□□□□□ -1.73
YBX3-210ENST00000540975 FAM170AA1A519 330 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 SMIM30A4D0T7 59 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 REC8O95072 547 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 P0C879 139 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 LAMP1P11279 417 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 FCARP24071 287 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 TNNT3P45378 269 aaPredicted RBP4.23□□□□□ -1.73
YBX3-210ENST00000540975 GTF2A1P52655 376 aaPredicted RBP4.23□□□□□ -1.73
YBX3-210ENST00000540975 SMSP52788 366 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 NDST1P52848 882 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 TRDNQ13061 729 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 KIAA0040Q15053 153 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 SGCBQ16585 318 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 AARDQ4LEZ3 155 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 SLC10A5Q5PT55 438 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 C9orf129Q5T035 196 aaKnown RBP4.23□□□□□ -1.73
YBX3-210ENST00000540975 C2orf66Q6UXQ4 117 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 UBQLNLQ8IYU4 475 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 FAM184AQ8NB25 1140 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 RPGRIP1Q96KN7 1286 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 MAPKAP1Q9BPZ7 522 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 FAM173AQ9BQD7 235 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 GPR174Q9BXC1 333 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 MMADHCQ9H3L0 296 aaPredicted RBP4.23□□□□□ -1.73
YBX3-210ENST00000540975 VPS54Q9P1Q0 977 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 STX8Q9UNK0 236 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 MOKQ9UQ07 419 aa4.23□□□□□ -1.73
YBX3-210ENST00000540975 ZFP37Q9Y6Q3 630 aaPredicted RBP4.23□□□□□ -1.73
YBX3-210ENST00000540975 BRD4O60885 1362 aaPredicted RBP4.23□□□□□ -1.73
YBX3-210ENST00000540975 A8MX80 341 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 TNFSF11O14788 317 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 SH2D1BO14796 132 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 AKAP3O75969 853 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 SLC35E2P0CK97 266 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 PRG2P13727 222 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 CCNCP24863 283 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 GEMP55040 296 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 NME5P56597 212 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 HSD17B7P56937 341 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 RCN2Q14257 317 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 SLC10A1Q14973 349 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 ISXQ2M1V0 245 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 PAN3Q58A45 887 aaKnown RBP4.22□□□□□ -1.73
YBX3-210ENST00000540975 TCHHL1Q5QJ38 904 aaPredicted RBP4.22□□□□□ -1.73
YBX3-210ENST00000540975 IRGCQ6NXR0 463 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 STOX1Q6ZVD7 989 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 Q8N9G6 341 aaPredicted RBP4.22□□□□□ -1.73
YBX3-210ENST00000540975 RDH11Q8TC12 318 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 SNX21Q969T3 373 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 SLC39A3Q9BRY0 314 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 DESI2Q9BSY9 194 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 TRIM9Q9C026 710 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 SLC7A5P2Q9GIP4 190 aa4.22□□□□□ -1.73
YBX3-210ENST00000540975 DCLRE1BQ9H816 532 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms