RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 OSBPL11Q9BXB4 747 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 OR2B2Q9GZK3 357 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 GSX1Q9H4S2 264 aaPredicted RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 CPSF2Q9P2I0 782 aaKnown RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ZNF639Q9UID6 485 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 CES1P1Q9UKY3 287 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 EXO1Q9UQ84 846 aaKnown RBP10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 DTX4Q9Y2E6 619 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 PCDHA9Q9Y5H5 950 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 NINQ8N4C6 2090 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 NCKAP5O14513 1909 aa10.94□□□□□ -0.66
CBX3P4-202ENST00000540428 ABCA2Q9BZC7 2435 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 ICOSLGO75144 302 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 ALDOAP04075 364 aaKnown RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 HRGP04196 525 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 RBP1P09455 135 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 CSNK2A2P19784 350 aaPredicted RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 CHMP24386 653 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 TYK2P29597 1187 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 HOXC12P31275 282 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 DEKP35659 375 aaKnown RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 SLCO1A2P46721 670 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 CCNG1P51959 295 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 AGFG1P52594 562 aaKnown RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 MAPK12P53778 367 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 C2orf54Q08AI8 447 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 MGAT2Q10469 447 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 IFT88Q13099 833 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 TRAF3Q13114 568 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 TTC19Q6DKK2 380 aaPredicted RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 PTGR2Q8N8N7 351 aaPredicted RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 OR52B6Q8NGF0 335 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 SMPDL3BQ92485 455 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 WNT2BQ93097 391 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 CTHRC1Q96CG8 243 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 OMA1Q96E52 524 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 C18orf12Q96KH6 178 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 CDK15Q96Q40 435 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 NODALQ96S42 347 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 TUBA1CQ9BQE3 449 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 LRRC1Q9BTT6 524 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 ITPAQ9BY32 194 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 MRPL1Q9BYD6 325 aaKnown RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 BRINP2Q9C0B6 783 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 PIGMQ9H3S5 423 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 GRPEL1Q9HAV7 217 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 NEUROD4Q9HD90 331 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 BEX4Q9NWD9 120 aaPredicted RBP10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 MAT2BQ9NZL9 334 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 PRODH2Q9UF12 536 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 PSME2Q9UL46 239 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 ACANP16112 2415 aa10.93□□□□□ -0.66
CBX3P4-202ENST00000540428 NAV3Q8IVL0 2385 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 PRAMEF25A6NGN4 478 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 H0Y3Z8 333 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 TO15178 435 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 ABCB7O75027 752 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 UGT2B11O75310 529 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 DRD5P21918 477 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 SOX18P35713 384 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 PPICP45877 212 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 PCYT1AP49585 367 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 FOXF2Q12947 444 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 GAB1Q13480 694 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 SHEQ5VZ18 495 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 AAGABQ6PD74 315 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 FAM111BQ6SJ93 734 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 COMMD6Q7Z4G1 85 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 WFDC11Q8NEX6 87 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 OR14L1PQ8NHC6 308 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 TMCO6Q96DC7 493 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 ELOVL6Q9H5J4 265 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 BRF2Q9HAW0 419 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 ZBTB26Q9HCK0 441 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 SERHLQ9NQF3 203 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 GALNT8Q9NY28 637 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 KLRF1Q9NZS2 232 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 CLCF1Q9UBD9 225 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 BCAP29Q9UHQ4 241 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 PCTPQ9UKL6 214 aa10.92□□□□□ -0.66
CBX3P4-202ENST00000540428 SH3D21A4FU49 640 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 FRG2CA6NGY1 282 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 OR6C70A6NIJ9 312 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 ERAL1O75616 437 aaKnown RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 BCAS2O75934 225 aaPredicted RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 CBX7O95931 251 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 CD53P19397 219 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 SRD5A2P31213 254 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PHBP35232 272 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 FEN1P39748 380 aaKnown RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 MAGEA12P43365 314 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 CPA2P48052 419 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 DIO3P55073 304 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 GFRA1P56159 465 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 TRA2BP62995 288 aaKnown RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 PSPHP78330 225 aa10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 GALNT1Q10472 559 aaPredicted RBP10.91□□□□□ -0.66
CBX3P4-202ENST00000540428 EXOSC7Q15024 291 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms