RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 LOC105369274A0A096LPK9 316 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 LOC102723532A0A0G2JNH3 316 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 ZNF99A8MXY4 864 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 FFAR1O14842 300 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 RGS10O43665 173 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 UBXN7O94888 489 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 CCNA2P20248 432 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 CBLP22681 906 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 PTGER1P34995 402 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 BUD31P41223 144 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 SMN1Q16637 294 aaKnown RBP19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 Q6ZPB1 254 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 OR4N4Q8N0Y3 316 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 DEPDC4Q8N2C3 294 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 PARP8Q8N3A8 854 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 SDR16C5Q8N3Y7 309 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 AQP11Q8NBQ7 271 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 FAM81AQ8TBF8 368 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 APH1BQ8WW43 257 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 RORBQ92753 470 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 ZNF681Q96N22 645 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 UCK1Q9HA47 277 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 NMNAT1Q9HAN9 279 aaPredicted RBP19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 PHF11Q9UIL8 331 aa19.03■□□□□ 0.64
PACSIN3-211ENST00000539589 SCN2AQ99250 2005 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 TTC28Q96AY4 2481 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 RP1P56715 2156 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 TCTN3Q6NUS6 607 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 SVOPQ8N4V2 548 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 CAMKVQ8NCB2 501 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 FAR1Q8WVX9 515 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 SERINC2Q96SA4 455 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 YIPF4Q9BSR8 244 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 RSPO3Q9BXY4 272 aaPredicted RBP19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 PCDHGA10Q9Y5H3 936 aa19.02■□□□□ 0.64
PACSIN3-211ENST00000539589 HCRTR1O43613 425 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 INMTO95050 263 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 ST6GAL1P15907 406 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 GSSP48637 474 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 SMIM11AP58511 58 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 COL9A2Q14055 689 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 C14orf28Q4W4Y0 310 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 DEF8Q6ZN54 512 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 SAMD14Q8IZD0 417 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 VANGL1Q8TAA9 524 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 GTPBP3Q969Y2 492 aaKnown RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 ELP4Q96EB1 424 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 FSCN3Q9NQT6 498 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 UNC13CQ8NB66 2214 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 A0A0G2JPF8 293 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 A0A1W2PPW3 197 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 LILRA5A6NI73 299 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 HNRNPCL2B2RXH8 293 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 HNRNPCL3B7ZW38 293 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 HNRNPCL4P0DMR1 293 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 SMIM10L1P0DMW3 83 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 CDK4P11802 303 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 POU2F1P14859 743 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 ZNF10P21506 573 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 FUT4P22083 530 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 CPN2P22792 545 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 TNFRSF17Q02223 184 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 RELAQ04206 551 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 FOXD4Q12950 439 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 FGD3Q5JSP0 725 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 PRAMEF8Q5VWM4 474 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 PRAMEF7Q5VXH5 474 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 DHRS4L2Q6PKH6 230 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 RNF44Q7L0R7 432 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 PRSS48Q7RTY5 328 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 OR9A2Q8NGT5 310 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 RHOXF1Q8NHV9 184 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 SMIM10Q96HG1 83 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 ELF4Q99607 663 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 SLC38A3Q99624 504 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 BTBD2Q9BX70 525 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 GPN2Q9H9Y4 310 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 FAM60AQ9NP50 221 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 WDR87Q6ZQQ6 2873 aa19.01■□□□□ 0.63
PACSIN3-211ENST00000539589 A0A1W2PS29 197 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 B3GALT2O43825 422 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 OXSR1O95747 527 aaPredicted RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 GASTP01350 101 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 PROS1P07225 676 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 H1F0P07305 194 aaKnown RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 MC3RP41968 323 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 IDH2P48735 452 aaKnown RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 GP2P55259 537 aaKnown RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 MVKQ03426 396 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 DCST1Q5T197 706 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 ZNF770Q6IQ21 691 aaPredicted RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 ABHD13Q7L211 337 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 DTWD2Q8NBA8 298 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 AVL9Q8NBF6 648 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 NUP43Q8NFH3 380 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 ZCCHC10Q8TBK6 192 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 RERGQ96A58 199 aaPredicted RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 OTUB1Q96FW1 271 aaPredicted RBP19■□□□□ 0.63
PACSIN3-211ENST00000539589 DHRS1Q96LJ7 313 aa19■□□□□ 0.63
PACSIN3-211ENST00000539589 ZFYVE21Q9BQ24 234 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms