RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NLGN4YQ8NFZ3 816 aaPredicted RBP9.12□□□□□ -0.95
CDH13-204ENST00000539548 BBS10Q8TAM1 723 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 RGMAQ96B86 450 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 SLC35G5Q96KT7 338 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 COQ7Q99807 217 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 ATF6BQ99941 703 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 BEX2Q9BXY8 128 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 OR52A5Q9H2C5 316 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 NT5DC2Q9H857 520 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 LHX9Q9NQ69 397 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 GIMAP4Q9NUV9 329 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 TOR4AQ9NXH8 423 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 C5AR2Q9P296 337 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 COMMD3Q9UBI1 195 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 ADAM29Q9UKF5 820 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 ALG5Q9Y673 324 aa9.12□□□□□ -0.95
CDH13-204ENST00000539548 K7ESM1 405 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CASKO14936 926 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 SPINT1O43278 529 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 ARHGEF9O43307 516 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 HPGDSO60760 199 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 C1QBP02746 253 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 C8AP07357 584 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CCNYL3P0C7X3 344 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CHRNB1P11230 501 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 ERGP11308 486 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CCR2P41597 374 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CAV3P56539 151 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDH13-204ENST00000539548 C19orf57Q0VDD7 668 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 NFE2L1Q14494 772 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 TATDN3Q17R31 274 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 NUDT13Q86X67 352 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 C2orf73Q8N5S3 287 aaPredicted RBP9.11□□□□□ -0.95
CDH13-204ENST00000539548 OR6T1Q8NGN1 323 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 TEX47Q8TBZ9 253 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 GNPDA2Q8TDQ7 276 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 SLC9A6Q92581 669 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CHFRQ96EP1 664 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CAPNS2Q96L46 248 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 TMEM43Q9BTV4 400 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 ACAT2Q9BWD1 397 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 PLA2G12AQ9BZM1 189 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 WASH6PQ9NQA3 447 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 TRPC4Q9UBN4 977 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 PLAGL1Q9UM63 463 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 ASF1AQ9Y294 204 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 CKAP5Q14008 2032 aa9.11□□□□□ -0.95
CDH13-204ENST00000539548 SMIM30A4D0T7 59 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 LRRTM2O43300 516 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 LYRM1O43325 122 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TMPRSS11DO60235 418 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PQBP1O60828 265 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 ZNF780AO75290 641 aaPredicted RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 SLC43A1O75387 559 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 DRD2P14416 443 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 IFNGR2P38484 337 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 GPR1P46091 355 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 SLC6A11P48066 632 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CCR8P51685 355 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CLDN20P56880 219 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TRA2BP62995 288 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 ACSM1Q08AH1 577 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 ARHGAP19Q14CB8 494 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 SF3A2Q15428 464 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 TYW3Q6IPR3 259 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 MZT2AQ6P582 158 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PAMR1Q6UXH9 720 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 ARIH2OSQ8N7S6 290 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 OR5D16Q8NGK9 328 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 OR5AR1Q8NGP9 310 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 NR4A3Q92570 626 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CAMK1GQ96NX5 476 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 SLC38A2Q96QD8 506 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 KCNJ15Q99712 375 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 MARVELD1Q9BSK0 173 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PITHD1Q9GZP4 211 aaPredicted RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 EGLN3Q9H6Z9 239 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 KCNK12Q9HB15 430 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 A0A087WUU8 490 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 A0A0G2JPF8 293 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 FAM240BA0A1B0GVZ2 78 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 HNRNPCL2B2RXH8 293 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 HNRNPCL3B7ZW38 293 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 SGK494L7N484 410 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CASC3O15234 703 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 NDUFS4O43181 175 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 NDUFB5O43674 189 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 VEGFDO43915 354 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 UBXN7O94888 489 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 APOL3O95236 402 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 FGBP02675 491 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 HLA-DPB1P04440 258 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 HNRNPCL4P0DMR1 293 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 PSKH1P11801 424 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 CFL1P23528 166 aaKnown RBP9.1□□□□□ -0.95
CDH13-204ENST00000539548 HSD17B2P37059 387 aa9.1□□□□□ -0.95
CDH13-204ENST00000539548 SLC1A3P43003 542 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms