RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ITIH5Q86UX2 942 aa2.84□□□□□ -1.95
CCDC7-209ENST00000539197 ZNF540Q8NDQ6 660 aa2.84□□□□□ -1.95
CCDC7-209ENST00000539197 PANX3Q96QZ0 392 aa2.84□□□□□ -1.95
CCDC7-209ENST00000539197 JPH2Q9BR39 696 aaPredicted RBP2.84□□□□□ -1.95
CCDC7-209ENST00000539197 ADPGKQ9BRR6 497 aa2.84□□□□□ -1.95
CCDC7-209ENST00000539197 NUSAP1Q9BXS6 441 aaKnown RBP2.84□□□□□ -1.95
CCDC7-209ENST00000539197 LRRK1Q38SD2 2015 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 MYO10Q9HD67 2058 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 G3V3Y1 287 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 IGHV3-23P01764 117 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 CCDC166P0CW27 439 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 CT45A8P0DMV1 189 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 CT45A9P0DMV2 189 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 SLC12A3P55017 1021 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 GIT2Q14161 759 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 CT45A2Q5DJT8 189 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 MS4A13Q5J8X5 152 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 MOB2Q70IA6 237 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 MOB1BQ7L9L4 216 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 ASPGQ86U10 573 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 CADM2Q8N3J6 435 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 CFAP36Q96G28 342 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 C9orf85Q96MD7 179 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 TRIM9Q9C026 710 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 EHD1Q9H4M9 534 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 COPS7BQ9H9Q2 264 aaPredicted RBP2.83□□□□□ -1.96
CCDC7-209ENST00000539197 SLC25A19Q9HC21 320 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 SLC9A8Q9Y2E8 581 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 PTCH1Q13635 1447 aa2.83□□□□□ -1.96
CCDC7-209ENST00000539197 H0YIG0 161 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 GMNNO75496 209 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 ALPIP09923 528 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 CT45A10P0DMU9 189 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 CCNE1P24864 410 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 PTPN4P29074 926 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 RBMXP38159 391 aaKnown RBP2.82□□□□□ -1.96
CCDC7-209ENST00000539197 SLC26A2P50443 739 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 TNFSF10P50591 281 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 YWHAHQ04917 246 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-209ENST00000539197 GTF3C1Q12789 2109 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 SCARB2Q14108 478 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 FUT11Q495W5 492 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 SBK1Q52WX2 424 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 MPPE1Q53F39 396 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 SPATA46Q5T0L3 261 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 C11orf88Q6PI97 169 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 ZNF589Q86UQ0 364 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-209ENST00000539197 SYCP3Q8IZU3 236 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 OR6M1Q8NGM8 313 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 GOT1L1Q8NHS2 421 aaPredicted RBP2.82□□□□□ -1.96
CCDC7-209ENST00000539197 HAS2Q92819 552 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 SLC25A38Q96DW6 304 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 CXorf58Q96LI9 332 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 PRAM1Q96QH2 718 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 C19orf43Q9BQ61 176 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 ELOVL4Q9GZR5 314 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 ZDHHC6Q9H6R6 413 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 ZNF221Q9UK13 617 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 PDE10AQ9Y233 779 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 AFF2P51816 1311 aa2.82□□□□□ -1.96
CCDC7-209ENST00000539197 KIR2DL5BA0A0G2JN68 375 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 KIR2DL5BA0A0G2JPC4 375 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 NME6O75414 186 aaPredicted RBP2.81□□□□□ -1.96
CCDC7-209ENST00000539197 CPNE6O95741 557 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 CHRNGP07510 517 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 ZNF44P15621 663 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 UCP1P25874 307 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 SERPINB6P35237 376 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 CAV2P51636 162 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 GEMP55040 296 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 ASIC1P78348 528 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 C16orf72Q14CZ0 275 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 STXBP2Q15833 593 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 RTL6Q6ICC9 239 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 KIR2DL5AQ8N109 375 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 MARC2Q969Z3 335 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 BIRC7Q96CA5 298 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 ZNF350Q9GZX5 532 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 TECRQ9NZ01 308 aaKnown RBP2.81□□□□□ -1.96
CCDC7-209ENST00000539197 ATG4BQ9Y4P1 393 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 ASTN1O14525 1302 aa2.81□□□□□ -1.96
CCDC7-209ENST00000539197 HIVEP2P31629 2446 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 A4D1N5 150 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 YJEFN3A6XGL0 299 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 CACNB4O00305 520 aaPredicted RBP2.8□□□□□ -1.96
CCDC7-209ENST00000539197 TSPAN2O60636 221 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 GPX5O75715 221 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 NUDT17P0C025 328 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 TOP1P11387 765 aaKnown RBP2.8□□□□□ -1.96
CCDC7-209ENST00000539197 ZNF45Q02386 682 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 STX1AQ16623 288 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 TYSND1Q2T9J0 566 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 IFI44LQ53G44 452 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 TAF3Q5VWG9 929 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 IL34Q6ZMJ4 242 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 ADAMTSL5Q6ZMM2 481 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 LINC00696Q6ZRV3 163 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 ASRGL1Q7L266 308 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 LUZP1Q86V48 1076 aa2.8□□□□□ -1.96
CCDC7-209ENST00000539197 RDH11Q8TC12 318 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms