RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ATXN7L1Q9ULK2 861 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 FAM32AQ9Y421 112 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 LYVE1Q9Y5Y7 322 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 FER1L5A0AVI2 2057 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MT-ND2P03891 347 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 EPHA2P29317 976 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ST13P50502 369 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 EPHA4P54764 986 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 HBA1P69905 142 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 IL1RL1Q01638 556 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SPEM2Q0P670 501 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 KCNAB1Q14722 419 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 NR0B2Q15466 257 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 UBE2UQ5VVX9 321 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 RNF44Q7L0R7 432 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 UBE3DQ7Z6J8 389 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ENTHD1Q8IYW4 607 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MMP21Q8N119 569 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 C16orf78Q8WTQ4 265 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 APH1BQ8WW43 257 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 AHCYL2Q96HN2 611 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ZFYVE21Q9BQ24 234 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SARGQ9BW04 601 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SEMA6CQ9H3T2 930 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SYNDIG1Q9H7V2 258 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 NT5DC2Q9H857 520 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 HMG20AQ9NP66 347 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 STARD5Q9NSY2 213 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 PCDHGA6Q9Y5G7 932 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 COL5A1P20908 1838 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 RIF1Q5UIP0 2472 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-202ENST00000536708 LRIT2A6NDA9 550 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CLDN24A6NM45 220 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 DUX1O43812 170 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 PCDHGA12O60330 932 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 FAM20BO75063 409 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CLEC3AO75596 197 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 EIF2S1P05198 315 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ALOX5P09917 674 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ANXA8P13928 327 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CD1CP29017 333 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 RRM2P31350 389 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 KRT20P35900 424 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MAP2K4P45985 399 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 RPS15AP62244 130 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CD300CQ08708 224 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ADPRMQ3LIE5 342 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 IFI44LQ53G44 452 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CRB2Q5IJ48 1285 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 TOR1AIP1Q5JTV8 583 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 DEPDC1Q5TB30 811 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 P2RY8Q86VZ1 359 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SHISA5Q8N114 240 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ZCCHC10Q8TBK6 192 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 FCGR1BQ92637 280 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MAL2Q969L2 176 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 TEFMQ96QE5 360 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SLX1AQ9BQ83 275 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CCDC3Q9BQI4 270 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 PITHD1Q9GZP4 211 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MRPS2Q9Y399 296 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 KLK4Q9Y5K2 254 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 A0A1W2PQM1 296 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 TLCD2A6NGC4 264 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 H0YGG7 62 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 TNFRSF11BO00300 401 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ERI3O43414 337 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 KLK1P06870 262 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 AHRP35869 848 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 GGT2P36268 569 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SEPHS1P49903 392 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 HMGA2P52926 109 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 RAB8AP61006 207 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ARF3P61204 181 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SMN1Q16637 294 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ZNF630Q2M218 657 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MPEG1Q2M385 716 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 COX20Q5RI15 118 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 ZNF793Q6ZN11 406 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 IKBIPQ70UQ0 350 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 BTLAQ7Z6A9 289 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SLC30A8Q8IWU4 369 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SCAIQ8N9R8 606 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 DYNC2LI1Q8TCX1 351 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 PHF10Q8WUB8 498 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MS4A6EQ96DS6 147 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SLC35A5Q9BS91 424 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 RUBCNLQ9H714 662 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 FBXO8Q9NRD0 319 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 FKBP14Q9NWM8 211 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 AASSQ9UDR5 926 aa12.18□□□□□ -0.46
CDK5RAP3-202ENST00000536708 MN1Q10571 1320 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-202ENST00000536708 A8MU76 341 aa12.17□□□□□ -0.46
CDK5RAP3-202ENST00000536708 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-202ENST00000536708 C6orf47O95873 294 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms