RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PRAMEF25A6NGN4 478 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 A6NNC1 897 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 TRIM49D1C9J1S8 452 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 IL18BPO95998 194 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 CTAGE8P0CG41 777 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 TMIGD3P0DMS9 266 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 DRD2P14416 443 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ENDOUP21128 410 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 GPX3P22352 226 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 CHMP24386 653 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 TACR1P25103 407 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 MPIP34949 423 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 GSTM5P46439 218 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 IST1P53990 364 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 EEFSECP57772 596 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 SORDQ00796 357 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 MAP4K2Q12851 820 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 CSTF3Q12996 717 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 GAB1Q13480 694 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNHIT3Q15649 155 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 IMPG1Q17R60 797 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 SPIN4Q56A73 249 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 NHSL2Q5HYW2 709 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 WIPI1Q5MNZ9 446 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 VASNQ6EMK4 673 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF572Q7Z3I7 529 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 LIX1LQ8IVB5 337 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 CTAGE4Q8IX94 777 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF615Q8N8J6 731 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF441Q8N8Z8 693 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 METTL6Q8TCB7 284 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ERP27Q96DN0 273 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 COL21A1Q96P44 957 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 BBS4Q96RK4 519 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ITPAQ9BY32 194 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 SDHAF3Q9NRP4 125 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 RASSF1Q9NS23 344 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 CCM2LQ9NUG4 571 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 STOML1Q9UBI4 398 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ST6GALNAC2Q9UJ37 374 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF180Q9UJW8 692 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 MAPRE3Q9UPY8 281 aa12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 EIF3LQ9Y262 564 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-205ENST00000535452 FAM221AA4D161 298 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 FRG2CA6NGY1 282 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 WASHC1A8K0Z3 465 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 SNPHO15079 494 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 COQ9O75208 318 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 PDYNP01213 254 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 ABCB1P08183 1280 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 GSTA1P08263 222 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 EPXP11678 715 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 BMP7P18075 431 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 DRD5P21918 477 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 PPICP45877 212 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 PSMD4P55036 377 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 NAA20P61599 178 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 SRYQ05066 204 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 CLCQ05315 142 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 TRAF3Q13114 568 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 TESK1Q15569 626 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 CEBPEQ15744 281 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 EIPR1Q53HC9 387 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 GPRIN3Q6ZVF9 776 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 YRDCQ86U90 279 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 GRAMD2AQ8IUY3 354 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 C1orf52Q8N6N3 182 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 CDYL2Q8N8U2 506 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 FAM83FQ8NEG4 500 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 OR4K17Q8NGC6 315 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 ZPLD1Q8TCW7 415 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 ADIPOR1Q96A54 375 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 CCDC126Q96EE4 140 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 C16orf45Q96MC5 204 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 SFXN2Q96NB2 322 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 UGT2B28Q9BY64 529 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 STMN4Q9H169 189 aaPredicted RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 NXF5Q9H1B4 397 aaKnown RBP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 EPB41L4BQ9H329 900 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 PIGMQ9H3S5 423 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 PTGES2Q9H7Z7 377 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 HHATLQ9HCP6 504 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 MIEF1Q9NQG6 463 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 TAS2R10Q9NYW0 307 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 TAS2R9Q9NYW1 312 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 MCM8Q9UJA3 840 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLSTN3-205ENST00000535452 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF407Q9C0G0 2248 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 OR6C70A6NIJ9 312 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 H3BQF6 201 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms