RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ITGA10O75578 1167 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 GJB3O75712 270 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SOX30O94993 753 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SIX6O95475 246 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 EPOP01588 193 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CSF3P09919 207 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SMIM6P0DI80 62 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 THEGLP0DJG4 465 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CD70P32970 193 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 RPS19P39019 145 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SOX3P41225 446 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SGSHP51688 502 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SMIM11AP58511 58 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TRAM2Q15035 370 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ZMAT1Q5H9K5 638 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SPANXN4Q5MJ08 99 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 OLFML2AQ68BL7 652 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ADNP2Q6IQ32 1131 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 C5orf46Q6UWT4 87 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM46DQ8NEK8 389 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 AKR7LQ8NHP1 331 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PYCR2Q96C36 320 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 MTFMTQ96DP5 389 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CHFRQ96EP1 664 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 C3orf30Q96M34 536 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC29A3Q9BZD2 475 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TEX10Q9NXF1 929 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TVP23BQ9NYZ1 205 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CLEC4EQ9ULY5 219 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 LOC285095A0A1B0GVY8 99 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TMEM189-UBE2V1I3L0A0 370 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CREBL2O60519 120 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 GADD45GO95257 159 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 STAU1O95793 577 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF35P13682 527 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 HMGA1P17096 107 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PTPN6P29350 595 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 GGT2P36268 569 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CTSOP43234 321 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 KCNJ5P48544 419 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CLDN20P56880 219 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SH3BP2P78314 561 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 BCL2L1Q07817 233 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 BIKQ13323 160 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 HEPACAMQ14CZ8 416 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 MPPE1Q53F39 396 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TCTE1Q5JU00 501 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PRPF38BQ5VTL8 546 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PLAG1Q6DJT9 500 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 LHFPL3Q86UP9 236 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PAQR7Q86WK9 346 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ADAMTS19Q8TE59 1207 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ZDHHC1Q8WTX9 485 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 C2orf15Q8WU43 125 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 IRF7Q92985 503 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 YIPF5Q969M3 257 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ESAMQ96AP7 390 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 FEVQ99581 238 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC38A3Q99624 504 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 CCM2Q9BSQ5 444 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ALOXE3Q9BYJ1 711 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 TINAGL1Q9GZM7 467 aaPredicted RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 SEMA3GQ9NS98 782 aa6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 DCAF13Q9NV06 445 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 PCDHGA9Q9Y5G4 932 aaKnown RBP6.46□□□□□ -1.38
TGFBR3-209ENST00000532540 ZCWPW2A0A1B0GU75 182 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GRXCR2A6NFK2 248 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 WASH4PA8MWX3 477 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LRRN3E7EW58 273 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 M0R036 132 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 FPGTO14772 594 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 FARS2O95363 451 aaKnown RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC34A2O95436 690 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 MBP02144 154 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ESR1P03372 595 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 APODP05090 189 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 HTR1AP08908 422 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 NFYAP23511 347 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 HRH2P25021 359 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 RENBPP51606 427 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 WNT3AP56704 352 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 HOXC5Q00444 222 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 KCNC3Q14003 757 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PTPRCAPQ14761 206 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PEA15Q15121 130 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PTPRRQ15256 657 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 DHCR24Q15392 516 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 KRBOX4Q5JUW0 171 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PAPD4Q6PIY7 484 aaKnown RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LRFN4Q6PJG9 635 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LINGO2Q7L985 606 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ARFGAP1Q8N6T3 406 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 CLDN22Q8N7P3 220 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 B3GNT7Q8NFL0 401 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 OR8D4Q8NGM9 314 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 KCTD13Q8WZ19 329 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 NSMAFQ92636 917 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 RBM14Q96PK6 669 aaKnown RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 TMED9Q9BVK6 235 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms