RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 RAB28P51157 221 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MFAP3P55082 362 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 KIAA1024LP59773 190 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 RPS8P62241 208 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 IGLV3-21P80748 117 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SPIBQ01892 262 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ILF2Q12905 390 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ABRQ12979 859 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SCGB2A2Q13296 93 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TRA2AQ13595 282 aaKnown RBP eCLIP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TSTA3Q13630 321 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 IL18Q14116 193 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 IL11RAQ14626 422 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SPCS2Q15005 226 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 KARSQ15046 597 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MEP1BQ16820 701 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 FAM83EQ2M2I3 478 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ANKRD20A4Q4UJ75 823 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ANKRD20A8PQ5CZ79 823 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ANKRD20A2Q5SQ80 823 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SAPCD1Q5SSQ6 148 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MPP7Q5T2T1 576 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ANKRD20A1Q5TYW2 823 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ANKRD20A3Q5VUR7 823 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 C11orf63Q6NUN7 778 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MFSD7Q6UXD7 560 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MACC1Q6ZN28 852 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 OTOAQ7RTW8 1153 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CNTN4Q8IWV2 1026 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 LGI2Q8N0V4 545 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 BHLHE23Q8NDY6 225 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 OR6J1Q8NGC5 347 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 OR4Q3Q8NH05 313 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 EXD1Q8NHP7 514 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SSC4DQ8WTU2 575 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SCFD1Q8WVM8 642 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TMIGD2Q96BF3 282 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 NUS1Q96E22 293 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 NSMCE2Q96MF7 247 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CDRT15Q96T59 188 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CYTH2Q99418 400 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 OLFM1Q99784 485 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 KCNS3Q9BQ31 491 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 SLC25A23Q9BV35 468 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MLPHQ9BV36 600 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 GPR88Q9GZN0 384 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 POLR1EQ9GZS1 481 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 COQ10BQ9H8M1 238 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 ANKZF1Q9H8Y5 726 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MRM3Q9HC36 420 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 OLAHQ9NV23 265 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TBC1D13Q9NVG8 400 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 CYP39A1Q9NYL5 469 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 NLGN3Q9NZ94 848 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 UXTQ9UBK9 157 aaPredicted RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 MRPS7Q9Y2R9 242 aaKnown RBP3.02□□□□□ -1.93
PTPRK-220ENST00000531466 TIMM22Q9Y584 194 aa3.02□□□□□ -1.93
PTPRK-220ENST00000531466 RPAP1Q9BWH6 1393 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 GOLGA8IPA6NC78 632 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 MFSD2BA6NFX1 497 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CCDC188H7C350 402 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 WRBO00258 174 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 XPO1O14980 1071 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ARPC2O15144 300 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 RAD51BO15315 384 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 BIRC5O15392 142 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ATP8B1O43520 1251 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CHMP2AO43633 222 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TADA2AO75478 443 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 WBP4O75554 376 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 RHBDL1O75783 438 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PSMD10O75832 226 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 RECQL5O94762 991 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 MYO1DO94832 1006 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 KRT8P05787 483 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 GLAP06280 429 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PABPC4LP0CB38 370 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CALM1P0DP23 149 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CALM2P0DP24 149 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CALM3P0DP25 149 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 THRBP10828 461 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ETS1P14921 441 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SELEP16581 610 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ERCC2P18074 760 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CYP2B6P20813 491 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CFL1P23528 166 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CPT2P23786 658 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 MAT2AP31153 395 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SOAT1P35610 550 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ACTR3P61158 418 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PPIAP62937 165 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 IL24Q13007 206 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 MSLNQ13421 630 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ANGPT1Q15389 498 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TSC22D1Q15714 1073 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 USF2Q15853 346 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SNAPC1Q16533 368 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 LEMD1Q68G75 181 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TEX38Q6PEX7 206 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TRAT1Q6PIZ9 186 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms