RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 PRR13Q9NZ81 148 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 CACNG4Q9UBN1 327 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 SLC25A13Q9UJS0 675 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 FBXO10Q9UK96 956 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 PNMA8BQ9ULN7 279 aaPredicted RBP6.34□□□□□ -1.39
ATM-206ENST00000525056 TBC1D24Q9ULP9 559 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 HS3ST2Q9Y278 367 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 SLC9A8Q9Y2E8 581 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 KLHL20Q9Y2M5 609 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 LSM2Q9Y333 95 aaKnown RBP6.34□□□□□ -1.39
ATM-206ENST00000525056 PCDHB7Q9Y5E2 793 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 NOX1Q9Y5S8 564 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 MAU2Q9Y6X3 613 aa6.34□□□□□ -1.39
ATM-206ENST00000525056 MTCL1Q9Y4B5 1905 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 GNG14A0A1W2PPG7 69 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 A0A1W2PRQ8 180 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 KRT87PA6NCN2 255 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 GABRR3A8MPY1 467 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 NOTOA8MTQ0 251 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 WASH3PC4AMC7 463 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 POLR1CO15160 346 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 CASC3O15234 703 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 PRODHO43272 600 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 AKAP8O43823 692 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 TBL1XO60907 577 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 PEX14O75381 377 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 GJB3O75712 270 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 FGF19O95750 216 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 HLA-DPB1P04440 258 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 RPN2P04844 631 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 H1F0P07305 194 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 TSPAN19P0C672 248 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 HSMCR30P0CW71 290 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 LAMP1P11279 417 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 IL9P15248 144 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 TACR1P25103 407 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 CTNNB1P35222 781 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 GDNFP39905 211 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 SPINT3P49223 89 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 INPP1P49441 399 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 GATMP50440 423 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 XKP51811 444 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 AP2S1P53680 142 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 HTRA4P83105 476 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 FAPQ12884 760 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 MRPL28Q13084 256 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 DUSP4Q13115 394 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 TARDBPQ13148 414 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATM-206ENST00000525056 EFR3AQ14156 821 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 DOC2AQ14183 400 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 ZNF284Q2VY69 593 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 C18orf21Q32NC0 220 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 CEP78Q5JTW2 689 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 LAIR1Q6GTX8 287 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 ZNF770Q6IQ21 691 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 CD200R1LQ6Q8B3 271 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 AGTRAPQ6RW13 159 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 SLC36A4Q6YBV0 504 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 FAM83HQ6ZRV2 1179 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 ZNF551Q7Z340 670 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 NRARPQ7Z6K4 114 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 RTN4RL1Q86UN2 441 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 CCDC28AQ8IWP9 274 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 NRSN1Q8IZ57 195 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 SLC34A3Q8N130 599 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 KRT78Q8N1N4 520 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 SLC43A2Q8N370 569 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 CLDN19Q8N6F1 224 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 FAM83FQ8NEG4 500 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 OR7G3Q8NG95 312 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 FIBINQ8TAL6 211 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATM-206ENST00000525056 LKAAEAR1Q8TD35 194 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 CREB3L4Q8TEY5 395 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 SKA2Q8WVK7 121 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 DNAJA4Q8WW22 397 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 OTULINQ96BN8 352 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 NEURL3Q96EH8 262 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 ALG14Q96F25 216 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 CCDC120Q96HB5 630 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 ZNF354BQ96LW1 612 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 BARD1Q99728 777 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 BOCQ9BWV1 1114 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 ALOXE3Q9BYJ1 711 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 POLR2J2Q9GZM3 115 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 BTBD1Q9H0C5 482 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 PCBD2Q9H0N5 130 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 POLR2J3Q9H1A7 115 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 PIGUQ9H490 435 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 RANBP3Q9H6Z4 567 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 UBE2ZQ9H832 354 aaPredicted RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 HHATLQ9HCP6 504 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 LTB4R2Q9NPC1 389 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 EXOSC4Q9NPD3 245 aaKnown RBP6.33□□□□□ -1.4
ATM-206ENST00000525056 PCDH12Q9NPG4 1184 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 MIEF1Q9NQG6 463 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 ACOXLQ9NUZ1 547 aa6.33□□□□□ -1.4
ATM-206ENST00000525056 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms