RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 SIRT5Q9NXA8 310 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 TNFRSF10DQ9UBN6 386 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 MID2Q9UJV3 735 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 RNF6Q9Y252 685 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 PLLPQ9Y342 182 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 LRBAP50851 2863 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 ARHGAP21Q5T5U3 1957 aa14.89□□□□□ -0.03
CLN8-206ENST00000523237 HCFC1P51610 2035 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 ACOX3O15254 700 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 PPM1BO75688 479 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 ABCB1P08183 1280 aaPredicted RBP14.88□□□□□ -0.03
CLN8-206ENST00000523237 PCSK2P16519 638 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 ENDOUP21128 410 aaKnown RBP14.88□□□□□ -0.03
CLN8-206ENST00000523237 SOX18P35713 384 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 CASP3P42574 277 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 KIR3DL1P43629 444 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 MASP1P48740 699 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 NUP107P57740 925 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 MRPS35P82673 323 aaKnown RBP14.88□□□□□ -0.03
CLN8-206ENST00000523237 ZNF763Q0D2J5 394 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 DUSP8Q13202 625 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 BICRALQ6AI39 1079 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 B3GNT6Q6ZMB0 384 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 CCDC116Q8IYX3 515 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 NEIL3Q8TAT5 605 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 ERP27Q96DN0 273 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 TTYH2Q9BSA4 534 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 ANKZF1Q9H8Y5 726 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 OXSMQ9NWU1 459 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 EHD3Q9NZN3 535 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 PKDREJQ9NTG1 2253 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 APCP25054 2843 aa14.88□□□□□ -0.03
CLN8-206ENST00000523237 HOXD4P09016 255 aaPredicted RBP14.87□□□□□ -0.03
CLN8-206ENST00000523237 GABRA1P14867 456 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 DRD5P21918 477 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 PPICP45877 212 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 EMDP50402 254 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 PLCXD2Q0VAA5 305 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 ERCC6LQ2NKX8 1250 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 ZNF628Q5EBL2 1059 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 LIPMQ5VYY2 423 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 NUP54Q7Z3B4 507 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 TRIM46Q7Z4K8 759 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 LURAP1LQ8IV03 231 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 C4orf33Q8N1A6 199 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 SIMC1Q8NDZ2 872 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 OR10Q1Q8NGQ4 319 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 LILRB4Q8NHJ6 448 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 OMA1Q96E52 524 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 TMEM41AQ96HV5 264 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 SPOCK3Q9BQ16 436 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 TRIM8Q9BZR9 551 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 SLC6A15Q9H2J7 730 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 C12orf65Q9H3J6 166 aaKnown RBP14.87□□□□□ -0.03
CLN8-206ENST00000523237 METTL7AQ9H8H3 244 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
CLN8-206ENST00000523237 SLC35C2Q9NQQ7 365 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 SENP1Q9P0U3 644 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 SPRR3Q9UBC9 169 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 PCDHGB3Q9Y5G1 929 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 FAM215AQ9Y5M1 114 aa14.87□□□□□ -0.03
CLN8-206ENST00000523237 TLDC2A0PJX2 215 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 FRG2CA6NGY1 282 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 TO15178 435 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 TRAPPC6AO75865 159 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 RSL1D1O76021 490 aaKnown RBP14.86□□□□□ -0.03
CLN8-206ENST00000523237 UROSP10746 265 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 DDCP20711 480 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 ELAVL4P26378 380 aaKnown RBP14.86□□□□□ -0.03
CLN8-206ENST00000523237 MPIP34949 423 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 TRPC1P48995 793 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 SLC18A2Q05940 514 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 C2orf80Q0P641 193 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 CEBPEQ15744 281 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 C1orf185Q5T7R7 199 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 TMEM81Q6P7N7 255 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 CCDC71Q8IV32 467 aaPredicted RBP14.86□□□□□ -0.03
CLN8-206ENST00000523237 FAM9CQ8IZT9 166 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 OR9A2Q8NGT5 310 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 CDC26Q8NHZ8 85 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 FAM76AQ8TAV0 307 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 KAT2AQ92830 837 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 GNRHR2Q96P88 292 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 IQCGQ9H095 443 aaKnown RBP14.86□□□□□ -0.03
CLN8-206ENST00000523237 ENKD1Q9H0I2 346 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 ALKBH4Q9NXW9 302 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 C15orf41Q9Y2V0 281 aa14.86□□□□□ -0.03
CLN8-206ENST00000523237 C15orf38-AP3S2A0A0A6YYH1 394 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 FAM90A27PA6NNH2 459 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 ENO4A6NNW6 628 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 FAM47E-STBD1D6RA91 191 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 GLI4P10075 376 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 CDK9P50750 372 aaKnown RBP14.85□□□□□ -0.03
CLN8-206ENST00000523237 SNTA1Q13424 505 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 FNDC7Q5VTL7 733 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 RTL6Q6ICC9 239 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 SLC30A6Q6NXT4 461 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 RIBC1Q8N443 379 aaPredicted RBP14.85□□□□□ -0.03
CLN8-206ENST00000523237 OR1J4Q8NGS1 313 aa14.85□□□□□ -0.03
CLN8-206ENST00000523237 HGDQ93099 445 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms