RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 C2orf72A6NCS6 295 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 PPM1BO75688 479 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 GLI4P10075 376 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 PTGER4P35408 488 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 TMED10P49755 219 aaKnown RBP17.12■□□□□ 0.33
SPIDR-220ENST00000522900 VSNL1P62760 191 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 CFAP157Q5JU67 520 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 TBCELQ5QJ74 424 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 TRIM46Q7Z4K8 759 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 OR9A2Q8NGT5 310 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 LILRB4Q8NHJ6 448 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 NEIL3Q8TAT5 605 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 RDH11Q8TC12 318 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 HGDQ93099 445 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 SARAFQ96BY9 339 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 OMA1Q96E52 524 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 LCORQ96JN0 433 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-220ENST00000522900 ZNF597Q96LX8 424 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 NODALQ96S42 347 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 SECISBP2Q96T21 854 aaKnown RBP17.12■□□□□ 0.33
SPIDR-220ENST00000522900 SLC35C2Q9NQQ7 365 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 QPCTLQ9NXS2 382 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 EHD3Q9NZN3 535 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 CFL2Q9Y281 166 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 APCP25054 2843 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 DCHS2Q6V1P9 2916 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 CDH16O75309 829 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 SNX4O95219 450 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 DRD5P21918 477 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 GDF1P27539 372 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 CHRNB4P30926 498 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 PPICP45877 212 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 C2orf80Q0P641 193 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 HEPACAMQ14CZ8 416 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 WLSQ5T9L3 541 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 CLEC6AQ6EIG7 209 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 C10orf107Q8IVU9 208 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPIDR-220ENST00000522900 ZNF675Q8TD23 568 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 ASB5Q8WWX0 329 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■■ 50.8
SPIDR-220ENST00000522900 HSPBAP1Q96EW2 488 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 EXO1Q9UQ84 846 aaKnown RBP17.11■□□□□ 0.33
SPIDR-220ENST00000522900 CCL27Q9Y4X3 112 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 PTGDR2Q9Y5Y4 395 aa17.11■□□□□ 0.33
SPIDR-220ENST00000522900 FIGNL2A6NMB9 653 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 FAM90A27PA6NNH2 459 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 GNB5O14775 395 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 UGT2B11O75310 529 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 TRAPPC6AO75865 159 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 TOXO94900 526 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 NAGAP17050 411 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 ADH7P40394 386 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 PTGDSP41222 190 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 IMPG1Q17R60 797 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 B3GNT6Q6ZMB0 384 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 ACAD11Q709F0 780 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 NUP54Q7Z3B4 507 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 PACS2Q86VP3 889 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 ACBD4Q8NC06 268 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 OR7G2Q8NG99 324 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 OR10Q1Q8NGQ4 319 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 CDC26Q8NHZ8 85 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 GATA5Q9BWX5 397 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-220ENST00000522900 ENKD1Q9H0I2 346 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 UBQLN3Q9H347 655 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 GALNT9Q9HCQ5 603 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 B4GALT7Q9UBV7 327 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 PRODH2Q9UF12 536 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 GPR55Q9Y2T6 319 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-220ENST00000522900 POLR3HQ9Y535 204 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-220ENST00000522900 ADGRG4Q8IZF6 3080 aa17.1■□□□□ 0.33
SPIDR-220ENST00000522900 TO15178 435 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 CRCPO75575 148 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 DDCP20711 480 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 MASP1P48740 699 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 CDK9P50750 372 aaKnown RBP17.09■□□□□ 0.33
SPIDR-220ENST00000522900 CORO7P57737 925 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 NAA20P61599 178 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 DCAF7P61962 342 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 TFF3Q07654 80 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 PLCXD2Q0VAA5 305 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 PCLAFQ15004 111 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 CEBPEQ15744 281 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 C1orf185Q5T7R7 199 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 LIPMQ5VYY2 423 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 FAM71E1Q6IPT2 247 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 NOXRED1Q6NXP6 359 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 GDF7Q7Z4P5 450 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 LIX1LQ8IVB5 337 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 TMBIM1Q969X1 311 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 SPOCK3Q9BQ16 436 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 METTL7AQ9H8H3 244 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 NPDC1Q9NQX5 325 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-220ENST00000522900 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 SLC6A5Q9Y345 797 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 NCKAP5O14513 1909 aa17.09■□□□□ 0.33
SPIDR-220ENST00000522900 A0A0G2JNJ9 132 aa17.08■□□□□ 0.32
SPIDR-220ENST00000522900 FRG2CA6NGY1 282 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms