RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF740Q8NDX6 193 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR1K1Q8NGR3 316 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR5W2Q8NH69 310 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 RNF139Q8WU17 664 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZBTB10Q96DT7 871 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 RBM41Q96IZ5 413 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 C9orf85Q96MD7 179 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TAAR1Q96RJ0 339 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 RMDN3Q96TC7 470 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TXN2Q99757 166 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 WRAP53Q9BUR4 548 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 FAM129AQ9BZQ8 928 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 DPEP3Q9H4B8 488 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 PHPT1Q9NRX4 125 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 KLHL28Q9NXS3 571 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 SARDHQ9UL12 918 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 EXOC6BQ9Y2D4 811 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 NEUROG3Q9Y4Z2 214 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 LAMA4Q16363 1823 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TNS2Q63HR2 1409 aa-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 TNRC6AQ8NDV7 1962 aaKnown RBP-1.85□□□□□ -2.71
RNU6-539P-201ENST00000516665 CCDC188H7C350 402 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 SULT2B1O00204 365 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZSCAN12O43309 604 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 PLOD3O60568 738 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 SDC3O75056 442 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 NDUFS3O75489 264 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 SLU7O95391 586 aaKnown RBP-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 CALCAP01258 141 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 GOT1P17174 413 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 PPM1AP35813 382 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 BTDP43251 543 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 NMUP48645 174 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 CASP6P55212 293 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 CLDN15P56746 228 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 PRPS1P60891 318 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 CSTF3Q12996 717 aaKnown RBP-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 PPP2R5CQ13362 524 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 PYDC2Q56P42 97 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 CDC73Q6P1J9 531 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 CLEC4GQ6UXB4 293 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 UNQ9165/PRO28630Q6UXU0 137 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 WDR86Q86TI4 376 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 SCYL3Q8IZE3 742 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF557Q8N988 423 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 POGLUT1Q8NBL1 392 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 RUBCNQ92622 972 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 HAVCR1Q96D42 359 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 L3HYPDHQ96EM0 354 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 ELMOD3Q96FG2 381 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 COG8Q96MW5 612 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 RNF157Q96PX1 679 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 HCAR1Q9BXC0 346 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 SDCBP2Q9H190 292 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 ALG9Q9H6U8 611 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 SH2D2AQ9NP31 389 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 DBF4Q9UBU7 674 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 MTRF1LQ9UGC7 380 aaKnown RBP-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 FBXO2Q9UK22 296 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 NENFQ9UMX5 172 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 FAM50BQ9Y247 325 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 IFT52Q9Y366 437 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 UNC79Q9P2D8 2635 aa-1.86□□□□□ -2.71
RNU6-539P-201ENST00000516665 KIAA2026Q5HYC2 2103 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 CREBBPQ92793 2442 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 NEMP2A6NFY4 417 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF98A6NK75 572 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 TMEM110-MUSTN1A8MSY1 372 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 MEIS2O14770 477 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZNF207O43670 478 aaKnown RBP-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 TSPAN1O60635 241 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 TMEM63AO94886 807 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 FGF19O95750 216 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 CSF2P04141 144 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 WNT2P09544 360 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ACTN1P12814 892 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 MAPK12P53778 367 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 SPIBQ01892 262 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 PPIL2Q13356 520 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 SLC17A1Q14916 467 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 EMC2Q15006 297 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 LONRF1Q17RB8 773 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 PCGF3Q3KNV8 242 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 UNC50Q53HI1 259 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 RABGAP1LQ5R372 815 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ARMCX2Q7L311 632 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 FAM220AQ7Z4H9 259 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ALPK2Q86TB3 2170 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 TMEM110Q86TL2 294 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ZDHHC21Q8IVQ6 265 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ARID3BQ8IVW6 561 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 MCOLN2Q8IZK6 566 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 TMTC2Q8N394 836 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 C15orf56Q8N910 161 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 TEX19Q8NA77 164 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 ST20-AS1Q8NBB2 130 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 OR10G4Q8NGN3 311 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 GPR119Q8TDV5 335 aa-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-1.87□□□□□ -2.71
RNU6-539P-201ENST00000516665 SMPDL3AQ92484 453 aa-1.87□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms