RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 IDSP22304 550 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ATP2B4P23634 1241 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BRD2P25440 801 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LMO2P25791 158 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IVDP26440 423 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PON1P27169 355 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ELK4P28324 431 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TACR3P29371 465 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PEBP1P30086 187 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HOXA7P31268 230 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 L1CAMP32004 1257 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CD70P32970 193 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PTPN7P35236 360 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SOAT1P35610 550 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HSD17B2P37059 387 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ARL1P40616 181 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RBM34P42696 430 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PAFAH1B1P43034 410 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MAGEA2P43356 314 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 REG1BP48304 166 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RFX3P48380 749 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PTDSS1P48651 473 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HCAR3P49019 387 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CAMLGP49069 296 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MTNR1BP49286 362 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 JAK3P52333 1124 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CTSCP53634 463 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RAD23AP54725 363 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PRRX1P54821 245 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GYS2P54840 703 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ALDH18A1P54886 795 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MAZP56270 477 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CLDN8P56748 225 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NUP107P57740 925 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GSDMDP57764 484 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SESN2P58004 480 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SESN3P58005 492 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GPR85P60893 370 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RPL37P61927 97 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RPS23P62266 143 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RPS15P62841 145 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 HERVK_113P63132 956 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ERVK-8P63133 956 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ERVK-25P63136 954 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IRX4P78413 519 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CX3CL1P78423 397 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KCNJ10P78508 379 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYCSP99999 105 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TFAP4Q01664 338 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ALDH6A1Q02252 535 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IRF8Q02556 426 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GUCA2AQ02747 115 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ITIH3Q06033 890 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC3A1Q07837 685 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KLKP1Q107X0 134 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PNRC1Q12796 327 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TFCP2Q12800 502 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IFRD2Q12894 506 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DHRS2Q13268 280 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 NMIQ13287 307 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GPR50Q13585 617 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CUL3Q13618 768 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ARFRP1Q13795 201 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TNFAIP1Q13829 316 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GTF2H2Q13888 395 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 BAATQ14032 418 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CYLC2Q14093 348 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GNMTQ14749 295 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LASP1Q14847 261 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMEM132DQ14C87 1099 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ACOX1Q15067 660 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PAFAH1B3Q15102 231 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SKIV2LQ15477 1246 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 CLUL1Q15846 466 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ENOX2Q16206 610 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PKN2Q16513 984 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 DUSP6Q16828 381 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IMPG1Q17R60 797 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZSWIM7Q19AV6 140 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 IQCJQ1A5X6 159 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRRC75BQ2VPJ9 315 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 LRRFIP1Q32MZ4 808 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ZNF829Q3KNS6 432 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 PLEKHG6Q3KR16 790 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 TMEM176BQ3YBM2 270 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 USH1GQ495M9 461 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MAP9Q49MG5 647 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MCMDC2Q4G0Z9 681 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GAGE2EQ4V326 116 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 GRIPAP1Q4V328 841 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SYTL3Q4VX76 610 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 KHDC1Q4VXA5 237 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RNASE12Q5GAN4 147 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 EFHC1Q5JVL4 640 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 SLC35D3Q5M8T2 416 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 RTP2Q5QGT7 225 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MRPL2Q5T653 305 aaKnown RBP-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 FAM69AQ5T7M9 428 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 MEI1Q5TIA1 1274 aa-0.84□□□□□ -2.54
SCARNA20.2-201ENST00000516052 ANKRD45Q5TZF3 282 aa-0.84□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms