RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 PCDHGB3Q9Y5G1 929 aa6.58□□□□□ -1.36
SCARNA6-201ENST00000515982 PTPN13Q12923 2485 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 TRBV11-1A0A0K0K1C0 115 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 RNF103-CHMP3A0A140T963 221 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 C2orf92A0A1B0GVN3 265 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 K7ENP7 123 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CLIC1O00299 241 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 UPK1AO00322 258 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 EBAG9O00559 213 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 FBP2O00757 339 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 MRASO14807 208 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CBX7O95931 251 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 AGR2O95994 175 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 IGKV3-11P04433 115 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 GSNP06396 782 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CT62P0C5K7 136 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 PLA2G2AP14555 144 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 WT1P19544 449 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 DRD5P21918 477 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 MATN1P21941 496 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CALB2P22676 271 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SSTR4P31391 388 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 PPICP45877 212 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 RASSF2P50749 326 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SLC37A1P57057 533 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 MRPS35P82673 323 aaKnown RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 TLE3Q04726 772 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SRSF6Q13247 344 aaKnown RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ZNHIT3Q15649 155 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 DEFB109BQ30KR1 87 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 PAGE3Q5JUK9 113 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 LRIF1Q5T3J3 769 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 FHL5Q5TD97 284 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 REP15Q6BDI9 236 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 INO80CQ6PI98 192 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 DLEU7Q6UYE1 221 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 HACD2Q6Y1H2 254 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SZRD1Q7Z422 152 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 DHDDSQ86SQ9 333 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 APLFQ8IW19 511 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SLC5A8Q8N695 610 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SLC15A4Q8N697 577 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 POU5F2Q8N7G0 328 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CDRT4Q8N9R6 151 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 APCDD1LQ8NCL9 501 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 OR7G2Q8NG99 324 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 NUBPLQ8TB37 319 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ELP5Q8TE02 316 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 DOK4Q8TEW6 326 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 TP53INP1Q96A56 240 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 LRRC58Q96CX6 371 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 RCN3Q96D15 328 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 NEURL3Q96EH8 262 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 FAM120BQ96EK7 910 aaKnown RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ZNF354BQ96LW1 612 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 MS4A4EQ96PG1 132 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 NPAS2Q99743 824 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 SLC35A5Q9BS91 424 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ACTRT3Q9BYD9 372 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 LHPPQ9H008 270 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ING2Q9H160 280 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CXorf36Q9H7Y0 433 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ARL8BQ9NVJ2 186 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 THUMPD1Q9NXG2 353 aaKnown RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 MAP10Q9P2G4 905 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 TEKT2Q9UIF3 430 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 MRTO4Q9UKD2 239 aaKnown RBP6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 CORO2BQ9UQ03 480 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 PCDHB14Q9Y5E9 798 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 GMEB1Q9Y692 573 aa6.57□□□□□ -1.36
SCARNA6-201ENST00000515982 COL6A6A6NMZ7 2263 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 C15orf38-AP3S2A0A0A6YYH1 394 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 ASPDHA6ND91 283 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 ARGFXA6NJG6 315 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 A8MUI8 341 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 B2RBV5 119 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 HRKO00198 91 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 ACOX3O15254 700 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 HNRNPCL1O60812 293 aaKnown RBP6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 HMGN2P05204 90 aaKnown RBP6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 ALOX5P09917 674 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 CD1EP15812 388 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 ITGA3P26006 1051 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 PTGER1P34995 402 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 CDKN2CP42773 168 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 EMDP50402 254 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 RNF4P78317 190 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 MXRA7P84157 204 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 CHAF1BQ13112 559 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 EXOSC7Q15024 291 aaKnown RBP6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 MEP1AQ16819 746 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 TRMT5Q32P41 509 aaKnown RBP6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 CYP27C1Q4G0S4 372 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 RUNDC3AQ59EK9 446 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 ATAD3BQ5T9A4 648 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 SAXO2Q658L1 398 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 H3F3CQ6NXT2 135 aa6.56□□□□□ -1.36
SCARNA6-201ENST00000515982 CDC73Q6P1J9 531 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms