RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CBWD5Q5RIA9 395 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 PDZK1Q5T2W1 519 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 GPATCH4Q5T3I0 446 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 LCN1P1Q5VSP4 162 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 HACD4Q5VWC8 232 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 GPR139Q6DWJ6 353 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 C3orf33Q6P1S2 294 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 C8orf82Q6P1X6 216 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 DNAJC24Q6P3W2 148 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 TMEM81Q6P7N7 255 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ISLR2Q6UXK2 745 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ZCCHC23Q6ZST2 131 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 Q6ZTC4 211 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 IKBIPQ70UQ0 350 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 RAB11FIP2Q7L804 512 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ZNF720Q7Z2F6 126 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 GALNT10Q86SR1 603 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 LHFPL3Q86UP9 236 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 FAM160B2Q86V87 743 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC47A2Q86VL8 602 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 RNF130Q86XS8 419 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 SPATA2LQ8IUW3 424 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 C10orf107Q8IVU9 208 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 OFCC1Q8IZS5 231 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 OR8H3Q8N146 312 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 CHDHQ8NE62 594 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 OR1M1Q8NGA1 313 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 OR52E4Q8NGH9 312 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ITFG1Q8TB96 612 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 FAR1Q8WVX9 515 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 PMM1Q92871 262 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 BADQ92934 168 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 MYLPFQ96A32 169 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 KIAA1191Q96A73 305 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 MIB2Q96AX9 1013 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 RAD51AP1Q96B01 352 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 TBC1D20Q96BZ9 403 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 C19orf60Q96EN9 201 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ERMAPQ96PL5 475 aaPredicted RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ABCG4Q9H172 646 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 MAGIXQ9H6Y5 334 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 CATSPERBQ9H7T0 1116 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 CYP3A43Q9HB55 503 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 NMRAL1Q9HBL8 299 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 POLE4Q9NR33 117 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 GKN1Q9NS71 199 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 UFSP2Q9NUQ7 469 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 FAM118AQ9NWS6 357 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 FBXL12Q9NXK8 326 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 DPP3Q9NY33 737 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 RDH8Q9NYR8 311 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 ERVK-18Q9QC07 812 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 OPTCQ9UBM4 332 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 MALT1Q9UDY8 824 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 UTS2RQ9UKP6 389 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 COPS3Q9UNS2 423 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 CORO2BQ9UQ03 480 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 RUVBL2Q9Y230 463 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 DDX60LQ5H9U9 1706 aaKnown RBP4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 CROCCQ5TZA2 2017 aa4.31□□□□□ -1.72
PDLIM5-211ENST00000508531 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 DOCK3Q8IZD9 2030 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SYNJ2BP-COX16A0A087WUM0 186 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 A0A0X1KG70 313 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 C17orf113A0A1B0GUU1 675 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 LOC100130705A0A1B0GUX0 176 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 IQCMA0A1B0GVH7 501 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 hCG_1807616A0A1W2PRN6 198 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 BCLAF3A2AJT9 711 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC15A5A6NIM6 579 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 MCIDASD6RGH6 385 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TMX2-CTNND1H3BSU7 103 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CDC7O00311 574 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CYB561D2O14569 222 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TNFRSF13BO14836 293 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ARPC2O15144 300 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CLIC2O15247 247 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 PRKAB2O43741 272 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SLC37A4O43826 429 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CST8O60676 142 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 LYPLA1O75608 230 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ZMPSTE24O75844 475 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 TMEM63AO94886 807 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 DHFRP00374 187 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 GSRP00390 522 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 C1QAP02745 245 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 FABP1P07148 127 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SERPINF2P08697 491 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ADORA3P0DMS8 318 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 ANXA3P12429 323 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 DARSP14868 501 aaKnown RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 RHCEP18577 417 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CD53P19397 219 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 EFNA1P20827 205 aaPredicted RBP4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 GJC1P36383 396 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CLCNKAP51800 687 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 AKR1D1P51857 326 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 CDH8P55286 799 aa4.3□□□□□ -1.72
PDLIM5-211ENST00000508531 SNX16P57768 344 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms