RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PSME4Q14997 1843 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 PTPRZ1P23471 2315 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 BPTFQ12830 3046 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 GTPBP10A4D1E9 387 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 KBTBD13C9JR72 458 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 H7C0S8 307 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 LYNP07948 512 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 TSPY3P0CV98 308 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 TSPY8P0CW00 308 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 SKILP12757 684 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 IER3P46695 156 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 SLC10A5Q5PT55 438 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 LYPLAL1Q5VWZ2 237 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 LIPJQ5W064 366 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 C4orf19Q8IY42 314 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 ZNF491Q8N8L2 437 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 CCDC89Q8N998 374 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 OPTNQ96CV9 577 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 PPP1R16AQ96I34 528 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 CDHR1Q96JP9 859 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 ERGIC2Q96RQ1 377 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 TEX13AQ9BXU3 409 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 NT5DC2Q9H857 520 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 RSPH14Q9UHP6 348 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 GPR132Q9UNW8 380 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 CEMIPQ8WUJ3 1361 aa3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 DDX60LQ5H9U9 1706 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-206ENST00000508524 MAP3K15Q6ZN16 1313 aa3.71□□□□□ -1.81
TOPBP1-206ENST00000508524 CCL15-CCL14A0A0B4J2E2 113 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 ZSCAN5CA6NGD5 496 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 FAM220BPB1ANY3 271 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 NEDD8-MDP1E9PL57 170 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 CTDSPLO15194 276 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 TSC22D2O75157 780 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 BBOX1O75936 387 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 KRT6AP02538 564 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 KRT6BP04259 564 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 RLN1P04808 185 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 APOA4P06727 396 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 CCDC159P0C7I6 412 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 GP5P40197 560 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 ID1P41134 155 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 BRCC3P46736 316 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 KRT6CP48668 564 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 SHHQ15465 462 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 CCL15Q16663 113 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 LRRC26Q2I0M4 334 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 ZNF730Q6ZMV8 503 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 SAMD12Q8N8I0 201 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 KIAA0895Q8NCT3 520 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 CKAP2Q8WWK9 683 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 RASL10BQ96S79 203 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 DEFB129Q9H1M3 183 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 SLCO1C1Q9NYB5 712 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 SPTBN2O15020 2390 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 BRWD1Q9NSI6 2320 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 ANKRD36CQ5JPF3 1778 aa3.71□□□□□ -1.82
TOPBP1-206ENST00000508524 GPR179Q6PRD1 2367 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 MAP1BP46821 2468 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 KLF18A0A0U1RQI7 1052 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 ERVV-1B6SEH8 477 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 M0R296 226 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 ST8SIA3O43173 380 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 LRRTM2O43300 516 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 RHBDL1O75783 438 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 ZBTB25P24278 435 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 ALDH3B1P43353 468 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 HMGCS2P54868 508 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 TEFQ10587 303 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 TFCP2Q12800 502 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 CRMP1Q14194 572 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 RFTN1Q14699 578 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 ABRAXAS2Q15018 415 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 CAVIN1Q6NZI2 390 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 CASC4Q6P4E1 433 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 VASH2Q86V25 355 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 BEST4Q8NFU0 473 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 RAET1EQ8TD07 263 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 DEFB126Q9BYW3 111 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 MYO9BQ13459 2157 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 GCN1Q92616 2671 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 LTBP2Q14767 1821 aa3.7□□□□□ -1.82
TOPBP1-206ENST00000508524 TRAV34A0A0B4J273 112 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CLRN2A0PK11 232 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CDX4O14627 284 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 SLC30A4O14863 429 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CSDE1O75534 798 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 UFL1O94874 794 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 LETM1O95202 739 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 ODC1P11926 461 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CCND3P30281 292 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 NF2P35240 595 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 TNFRSF4P43489 277 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 LCP2Q13094 533 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 VGLL4Q14135 290 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 CAPRIN1Q14444 709 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 SLC17A1Q14916 467 aa3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 TTC31Q49AM3 519 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-206ENST00000508524 SIGLEC15Q6ZMC9 328 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms