RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 IL4RP24394 825 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 PTPN4P29074 926 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 PTPN6P29350 595 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 CCND2P30279 289 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 PGFP49763 221 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 MFAP2P55001 183 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 HERVK_113P63132 956 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 ERVK-8P63133 956 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 NAAAQ02083 359 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 SRYQ05066 204 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 CYLC2Q14093 348 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 CEBPEQ15744 281 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 CD226Q15762 336 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 CNPY1Q3B7I2 92 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 LRIT3Q3SXY7 679 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 TTC31Q49AM3 519 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 LINC00242Q5T6M2 205 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 SEL1L3Q68CR1 1132 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 LEMD1Q68G75 181 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 UNC5DQ6UXZ4 953 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 STOX1Q6ZVD7 989 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 SYVN1Q86TM6 617 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 CENPSQ8N2Z9 138 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 POM121L12Q8N7R1 296 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 OR2L2Q8NH16 312 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 OR52J3Q8NH60 311 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 DLX4Q92988 240 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 LHX4Q969G2 390 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 FAM173AQ9BQD7 235 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 WRAP53Q9BUR4 548 aaKnown RBP3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 APOOQ9BUR5 198 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 ERVK-6Q9BXR3 956 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 ADGRL4Q9HBW9 690 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 PURGQ9UJV8 347 aaKnown RBP3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 FZR1Q9UM11 496 aa3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 KLF2Q9Y5W3 355 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P28-201ENST00000507778 E9PMD0 336 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 SGK494L7N484 410 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 PDLIM1O00151 329 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 CRLF1O75462 422 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 TRIM16O95361 564 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 TBX6O95947 436 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 IGSF6O95976 241 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 SNRPCP09234 159 aaKnown RBP3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 SLC35G4P0C7Q5 338 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 RRASP10301 218 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 ACADSP16219 412 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 CD86P42081 329 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 BRCC3P46736 316 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 SLC8A3P57103 927 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 TRA2BP62995 288 aaKnown RBP3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 FUT7Q11130 342 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 COX10Q12887 443 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 DPYSQ14117 519 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 ABRAXAS2Q15018 415 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 LPAL2Q16609 132 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 C14orf28Q4W4Y0 310 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 NHLRC3Q5JS37 347 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 ACER2Q5QJU3 275 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 C12orf60Q5U649 245 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 FAM219BQ5XKK7 198 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 REG3GQ6UW15 175 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 PAQR9Q6ZVX9 377 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 P4HA3Q7Z4N8 544 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 OR4F17Q8NGA8 305 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 FLVCR1-AS1Q8TAF5 88 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 ITLN1Q8WWA0 313 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 OR4F4Q96R69 305 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 TTYH2Q9BSA4 534 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 PUS3Q9BZE2 481 aaKnown RBP3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 TSPY26PQ9H489 355 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 AMBNQ9NP70 447 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 YAE1D1Q9NRH1 226 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 ZNF446Q9NWS9 450 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 GDAP2Q9NXN4 497 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 GPR83Q9NYM4 423 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 TAS2R3Q9NYW6 316 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 MLXQ9UH92 298 aa3.22□□□□□ -1.89
HMGB1P28-201ENST00000507778 ABCC4O15439 1325 aa3.21□□□□□ -1.89
HMGB1P28-201ENST00000507778 NCAPD2Q15021 1401 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 LRIT2A6NDA9 550 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 TRABD2BA6NFA1 517 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 NPIPA2E9PIF3 369 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 H3BTX0 84 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 E2F3O00716 465 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 NDUFA7O95182 113 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 MELTFP08582 738 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 HOXB7P09629 217 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 RFC2P35250 354 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 ELK3P41970 407 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 ARHGDIAP52565 204 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 MTTPP55157 894 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 HAND2P61296 217 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 HTD2P86397 168 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 IL9RQ01113 521 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 ZFP36L1Q07352 338 aaKnown RBP3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 CRMP1Q14194 572 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 C17orf58Q2M2W7 97 aa3.21□□□□□ -1.9
HMGB1P28-201ENST00000507778 MYPOPQ86VE0 399 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms